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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
496.4
nTPM
GTEx:
496.4
nTPM
FANTOM5:
278.0
Scaled Tags Per Million
Pig:
38.3
nTPM
Mouse:
586.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
496.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 496.4
Samples: 105
Max nTPM: 681.6
Min nTPM: 363.4
Std nTPM: 74.8
Median nTPM:
384_1
83 years, male
681.6
379_1
60 years, male
678.6
35_1
74 years, female
638.1
307_1
66 years, female
628.2
153_1
70 years, female
627.7
17_1
71 years, male
617.7
375_1
74 years, female
609.3
218_1
71 years, female
607.4
2_1
77 years, female
603.5
452_1
88 years, female
601.7
4_1
88 years, female
600.7
389_1
86 years, female
595.8
246_1
77 years, male
594.6
308_1
70 years, female
593.2
145_1
84 years, male
589.7
321_1
62 years, female
588.4
120_1
70 years, female
584.4
237_1
82 years, male
583.4
173_1
67 years, male
580.9
322_1
76 years, male
580.5
495_1
57 years, female
576.7
376_1
75 years, female
574.8
347_1
72 years, male
570.5
126_1
63 years, male
565.8
189_1
76 years, male
565.4
315_1
62 years, female
565.3
137_1
83 years, male
561.1
41_1
94 years, female
552.0
447_1
81 years, male
546.1
311_1
78 years, male
540.1
119_1
70 years, female
532.7
396_1
62 years, male
531.8
162_1
79 years, female
528.2
320_1
89 years, female
525.0
501_1
88 years, male
522.4
139_1
64 years, female
521.2
42_1
85 years, male
520.7
386_1
76 years, male
517.1
377_1
82 years, female
514.5
414_1
84 years, female
514.3
526_1
61 years, male
509.3
265_1
87 years, male
508.6
18_1
88 years, male
505.9
109_1
81 years, female
505.6
319_1
81 years, male
505.6
217_1
76 years, male
502.6
142_1
61 years, female
501.3
117_1
61 years, male
497.2
404_1
82 years, female
495.9
405_1
91 years, male
495.4
6_1
73 years, female
495.2
394_1
75 years, female
491.1
316_1
62 years, male
488.0
177_1
74 years, male
487.0
317_1
60 years, male
486.6
314_1
67 years, male
485.6
499_1
55 years, female
485.6
518_1
75 years, female
485.0
491_1
89 years, female
478.3
313_1
79 years, female
476.7
295_1
61 years, female
473.5
89_1
63 years, male
473.4
266_1
85 years, male
470.5
99_1
64 years, male
466.4
415_1
77 years, female
464.8
466_1
57 years, female
462.8
81_1
67 years, male
458.9
351_1
91 years, male
458.9
348_1
84 years, male
457.9
115_1
83 years, male
456.6
229_1
69 years, female
451.3
349_1
83 years, male
451.2
254_1
77 years, female
449.0
243_1
75 years, male
447.9
355_1
70 years, female
447.7
264_1
73 years, female
446.0
324_1
76 years, male
445.2
468_1
89 years, male
444.6
335_1
73 years, female
438.1
172_1
72 years, female
437.2
406_1
79 years, male
437.2
163_1
78 years, male
436.6
490_1
67 years, female
432.6
503_1
68 years, male
432.6
354_1
81 years, female
430.2
506_1
65 years, male
428.5
288_1
66 years, female
426.0
291_1
76 years, male
424.5
318_1
68 years, male
420.5
293_1
68 years, female
420.2
480_1
63 years, male
416.4
32_1
67 years, male
414.3
353_1
82 years, female
407.8
413_1
59 years, female
402.6
251_1
78 years, male
400.4
425_1
59 years, female
397.2
149_1
88 years, male
387.8
517_1
88 years, male
387.7
350_1
84 years, female
381.3
292_1
71 years, male
376.6
356_1
87 years, female
372.5
43_1
64 years, female
372.1
9_1
66 years, female
369.2
352_1
62 years, male
365.0
286_1
68 years, female
363.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
