We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
200.0
nTPM
HPA Brain:
129.4
nTPM
GTEx:
200.0
nTPM
FANTOM5:
235.7
Scaled Tags Per Million
Pig:
136.5
nTPM
Mouse:
220.3
nTPM
Allen mouse:
9.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
129.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 114.2
2019
Male, age 18, unknown
128.7
1827
Male, age 72, unknown
126.1
2411
Female, age 72, unknown
121.9
1870
Female, age 42, unknown
115.4
2828
Female, age 72, unknown
112.1
1833
Male, age 53, unknown
111.0
2219
Male, age 76, both hemispheres
110.2
1830
Male, age 51, unknown
108.7
2666
Male, age 74, left hemisphere
105.4
2586
Male, age 75, left hemisphere
102.0
Dorsal raphe nucleus nTPM: 115.2
2298
Female, age 72, unknown
136.0
2750
Male, age 76, both hemispheres
128.7
2047
Male, age 72, unknown
109.0
1828
Male, age 53, unknown
108.4
2016
Female, age 72, unknown
94.0
Inferior colliculus nTPM: 107.8
2097
Female, age 72, unknown
115.4
1890
Male, age 53, unknown
107.5
1848
Female, age 42, unknown
105.5
2849
Male, age 72, unknown
102.8
Median raphe nucleus nTPM: 129.4
2220
Male, age 76, midline
129.4
Periaquaductal grey, anterior nTPM: 115.6
1947
Male, age 18, unknown
119.7
2502
Female, age 75, unknown
115.7
1795
Male, age 51, unknown
111.3
Periaquaductal grey, dorsal nTPM: 92.3
1840
Male, age 53, unknown
95.9
1831
Male, age 72, unknown
95.8
2850
Male, age 76, both hemispheres
91.6
2464
Female, age 72, unknown
86.1
Periaquaductal grey, lateral nTPM: 98.7
2272
Male, age 74, both hemispheres
116.4
2053
Male, age 18, unknown
91.2
2140
Male, age 76, both hemispheres
88.4
Pretectal area nTPM: 115.2
2007
Male, age 72, unknown
139.2
1817
Female, age 42, unknown
134.2
1944
Female, age 72, unknown
133.2
1816
Male, age 51, unknown
131.4
1815
Male, age 53, unknown
121.4
2273
Male, age 74, both hemispheres
107.8
2224
Female, age 72, unknown
105.1
2407
Male, age 75, both hemispheres
102.5
2667
Female, age 75, unknown
101.3
2825
Male, age 18, unknown
98.3
2316
Male, age 76, right hemisphere
93.2
Red nucleus nTPM: 121.2
1821
Female, age 72, unknown
134.5
2785
Male, age 18, unknown
133.6
2503
Female, age 72, unknown
128.1
1865
Male, age 51, unknown
123.7
2725
Female, age 75, unknown
123.7
2823
Male, age 76, right hemisphere
119.4
1954
Female, age 42, unknown
119.2
1904
Male, age 53, unknown
119.0
2227
Male, age 72, unknown
114.8
2584
Male, age 75, left hemisphere
114.0
2588
Male, age 74, left hemisphere
112.5
2769
Male, age 72, unknown
112.4
Substantia nigra nTPM: 125.7
1916
Female, age 42, unknown
170.7
1941
Male, age 53, unknown
140.1
1851
Male, age 51, unknown
133.7
1889
Female, age 72, unknown
132.9
2590
Female, age 75, unknown
128.2
2241
Male, age 72, unknown
125.5
2699
Male, age 18, unknown
111.3
2583
Male, age 75, right hemisphere
109.6
2665
Male, age 74, both hemispheres
108.5
2409
Female, age 72, unknown
97.0
Superior colliculus nTPM: 109.5
2087
Female, age 72, unknown
123.5
2587
Male, age 74, left hemisphere
118.6
2261
Male, age 18, unknown
117.3
2668
Female, age 75, unknown
116.3
1796
Male, age 53, unknown
116.1
1895
Male, age 76, right hemisphere
107.1
1913
Female, age 42, unknown
106.5
1839
Male, age 51, unknown
104.5
1995
Male, age 72, unknown
96.0
2664
Male, age 75, both hemispheres
89.3
Ventral tegmental area nTPM: 117.5
2218
Male, age 76, both hemispheres
131.8
2410
Female, age 72, unknown
127.4
1915
Female, age 42, unknown
127.3
2223
Female, age 72, unknown
117.0
1942
Male, age 51, unknown
104.4
2021
Male, age 53, unknown
96.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
200.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 200.0
Samples: 139
Max nTPM: 337.5
Min nTPM: 115.5
Std nTPM: 43.3
Median nTPM: 195.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
337.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
322.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
313.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
311.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
297.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
293.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
281.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
280.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
277.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
276.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
271.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
270.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
269.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
269.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
258.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
258.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
251.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
250.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
245.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
244.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
241.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
240.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
238.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
238.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
237.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
231.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
229.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
229.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
228.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
228.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
226.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
223.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
223.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
223.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
222.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
218.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
218.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
218.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
217.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
217.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
215.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
214.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
214.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
214.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
213.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
212.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
210.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
210.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
209.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
209.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
209.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
207.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
206.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
205.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
205.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
204.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
203.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
202.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
201.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
201.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
200.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
199.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
198.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
198.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
197.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
197.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
197.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
196.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
195.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
195.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
195.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
195.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
194.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
193.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
193.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
191.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
190.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
190.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
189.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
188.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
188.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
188.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
187.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
187.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
187.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
186.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
184.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
182.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
182.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
181.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
180.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
180.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
179.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
178.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
178.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
178.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
177.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
177.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
176.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
175.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
174.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
174.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
174.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
169.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
169.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
168.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
167.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
165.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
163.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
163.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
161.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
160.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
160.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
159.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
159.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
158.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
157.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
157.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
157.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
156.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
156.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
156.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
155.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
153.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
152.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
150.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
149.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
149.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
148.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
147.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
145.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
143.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
132.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
127.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
126.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
122.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
121.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
120.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
115.5
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
220.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 220.3
Samples: 4
Max nTPM: 231.0
Min nTPM: 214.3
Sample A
Male
231.0
Sample B
Male
219.2
Sample C
Female
214.3
Sample D
Female
216.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.