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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
147.3
nTPM
HPA Brain:
262.0
nTPM
GTEx:
147.3
nTPM
FANTOM5:
27.6
Scaled Tags Per Million
Pig:
195.2
nTPM
Mouse:
131.8
nTPM
Allen mouse:
10.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
262.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 258.6
2586
Male, age 75, left hemisphere
382.0
2411
Female, age 72, unknown
273.8
2666
Male, age 74, left hemisphere
269.9
1833
Male, age 53, unknown
254.6
2019
Male, age 18, unknown
245.4
1830
Male, age 51, unknown
245.2
1870
Female, age 42, unknown
242.3
2828
Female, age 72, unknown
233.1
2219
Male, age 76, both hemispheres
220.5
1827
Male, age 72, unknown
219.2
Dorsal raphe nucleus nTPM: 219.7
2750
Male, age 76, both hemispheres
316.2
2047
Male, age 72, unknown
214.8
1828
Male, age 53, unknown
194.9
2298
Female, age 72, unknown
187.7
2016
Female, age 72, unknown
185.0
Inferior colliculus nTPM: 178.1
1890
Male, age 53, unknown
190.3
1848
Female, age 42, unknown
185.4
2849
Male, age 72, unknown
185.3
2097
Female, age 72, unknown
151.4
Median raphe nucleus nTPM: 234.7
2220
Male, age 76, midline
234.7
Periaquaductal grey, anterior nTPM: 226.4
1947
Male, age 18, unknown
241.7
1795
Male, age 51, unknown
225.2
2502
Female, age 75, unknown
212.3
Periaquaductal grey, dorsal nTPM: 176.0
2464
Female, age 72, unknown
194.7
1831
Male, age 72, unknown
185.4
1840
Male, age 53, unknown
163.4
2850
Male, age 76, both hemispheres
160.3
Periaquaductal grey, lateral nTPM: 168.7
2053
Male, age 18, unknown
182.5
2272
Male, age 74, both hemispheres
178.8
2140
Male, age 76, both hemispheres
144.8
Pretectal area nTPM: 215.0
2007
Male, age 72, unknown
263.7
1815
Male, age 53, unknown
253.9
1817
Female, age 42, unknown
246.6
2407
Male, age 75, both hemispheres
238.2
1816
Male, age 51, unknown
228.8
1944
Female, age 72, unknown
227.9
2825
Male, age 18, unknown
203.9
2316
Male, age 76, right hemisphere
193.8
2224
Female, age 72, unknown
179.4
2667
Female, age 75, unknown
173.6
2273
Male, age 74, both hemispheres
155.3
Red nucleus nTPM: 262.0
1904
Male, age 53, unknown
291.4
1865
Male, age 51, unknown
283.6
2584
Male, age 75, left hemisphere
281.2
2785
Male, age 18, unknown
279.8
2588
Male, age 74, left hemisphere
274.2
2769
Male, age 72, unknown
269.2
2227
Male, age 72, unknown
260.0
2823
Male, age 76, right hemisphere
259.6
1821
Female, age 72, unknown
251.9
2503
Female, age 72, unknown
247.2
1954
Female, age 42, unknown
227.3
2725
Female, age 75, unknown
218.6
Substantia nigra nTPM: 242.0
2583
Male, age 75, right hemisphere
288.9
1916
Female, age 42, unknown
279.4
1851
Male, age 51, unknown
271.9
2665
Male, age 74, both hemispheres
261.9
1889
Female, age 72, unknown
237.5
2590
Female, age 75, unknown
227.8
2699
Male, age 18, unknown
224.6
1941
Male, age 53, unknown
221.0
2409
Female, age 72, unknown
205.6
2241
Male, age 72, unknown
201.4
Superior colliculus nTPM: 241.1
2668
Female, age 75, unknown
388.3
1913
Female, age 42, unknown
246.5
1995
Male, age 72, unknown
234.0
2664
Male, age 75, both hemispheres
233.5
1796
Male, age 53, unknown
230.1
2261
Male, age 18, unknown
220.3
2087
Female, age 72, unknown
220.1
2587
Male, age 74, left hemisphere
216.7
1839
Male, age 51, unknown
211.9
1895
Male, age 76, right hemisphere
209.1
Ventral tegmental area nTPM: 251.1
2223
Female, age 72, unknown
291.9
2410
Female, age 72, unknown
275.9
1915
Female, age 42, unknown
244.1
2218
Male, age 76, both hemispheres
242.2
2021
Male, age 53, unknown
232.0
1942
Male, age 51, unknown
220.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
147.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 147.3
Samples: 139
Max nTPM: 278.4
Min nTPM: 76.6
Std nTPM: 37.3
Median nTPM: 147.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
278.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
271.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
246.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
240.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
239.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
237.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
218.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
217.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
208.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
205.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
201.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
196.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
191.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
191.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
190.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
188.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
187.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
183.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
181.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
181.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
181.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
180.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
179.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
178.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
176.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
173.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
171.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
171.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
168.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
165.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
165.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
165.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
165.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
165.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
163.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
162.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
162.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
162.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
161.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
160.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
159.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
159.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
158.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
158.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
158.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
158.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
157.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
156.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
156.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
156.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
154.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
154.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
154.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
154.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
154.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
153.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
153.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
153.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
152.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
152.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
152.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
152.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
151.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
151.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
151.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
151.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
150.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
148.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
147.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
147.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
146.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
146.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
145.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
144.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
144.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
143.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
143.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
143.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
143.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
142.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
142.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
142.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
142.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
139.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
138.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
138.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
135.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
130.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
130.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
130.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
129.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
129.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
128.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
128.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
127.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
127.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
126.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
125.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
123.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
123.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
122.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
121.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
121.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
121.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
121.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
121.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
121.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
119.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
118.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
117.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
115.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
115.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
114.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
113.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
112.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
110.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
110.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
110.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
109.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
109.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
108.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
106.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
104.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
103.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
102.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
102.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
101.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
100.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
99.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
98.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
94.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
94.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
91.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
91.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
87.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
85.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
79.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
77.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
76.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
131.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 131.9
Samples: 4
Max nTPM: 146.0
Min nTPM: 121.6
Sample A
Male
146.0
Sample B
Male
122.2
Sample C
Female
121.6
Sample D
Female
137.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.