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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
178.2
nTPM
HPA Brain:
253.3
nTPM
GTEx:
178.2
nTPM
FANTOM5:
58.3
Scaled Tags Per Million
Pig:
129.1
nTPM
Mouse:
221.3
nTPM
Allen mouse:
13.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
253.3
Sample id
Sample description
nTPM
Amygdala nTPM: 219.0
2814
Male, age 76, right hemisphere
251.3
2517
Female, age 94, left hemisphere
234.1
2514
Male, age 75, right hemisphere
219.2
1987
Female, age 91, left hemisphere
208.0
2695
Female, age 67, right hemisphere
182.5
Basal amygdala nTPM: 253.3
2243
Female, age 91, right hemisphere
286.2
2685
Female, age 94, left hemisphere
280.1
2827
Female, age 67, right hemisphere
264.7
2609
Male, age 75, right hemisphere
254.0
2110
Male, age 80, left hemisphere
232.1
1955
Male, age 76, both hemispheres
202.8
Central amygdala nTPM: 249.7
2239
Male, age 80, left hemisphere
282.6
2515
Male, age 75, right hemisphere
269.3
2826
Female, age 94, left hemisphere
268.4
1905
Male, age 76, both hemispheres
224.4
2701
Female, age 91, right hemisphere
203.6
Corticomedial amygdala nTPM: 252.3
2535
Female, age 67, right hemisphere
294.4
2829
Male, age 80, left hemisphere
271.9
2242
Female, age 91, right hemisphere
265.8
2428
Male, age 75, right hemisphere
251.0
2429
Female, age 94, left hemisphere
250.6
2240
Male, age 76, both hemispheres
180.4
Lateral amygdala nTPM: 246.4
2534
Female, age 94, left hemisphere
276.0
2830
Female, age 67, right hemisphere
256.3
1883
Male, age 76, both hemispheres
243.7
2256
Male, age 80, left hemisphere
242.4
2255
Female, age 91, right hemisphere
235.0
2516
Male, age 75, right hemisphere
224.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
178.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 178.2
Samples: 152
Max nTPM: 338.6
Min nTPM: 10.5
Std nTPM: 45.5
Median nTPM: 176.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
338.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
267.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
261.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
260.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
260.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
258.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
257.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
249.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
248.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
248.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
246.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
242.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
239.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
236.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
236.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
235.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
235.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
233.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
231.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
229.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
229.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
224.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
223.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
223.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
222.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
222.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
220.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
219.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
219.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
218.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
214.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
213.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
213.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
213.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
212.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
212.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
211.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
211.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
210.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
210.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
209.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
208.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
208.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
207.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
206.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
204.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
203.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
202.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
201.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
199.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
198.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
198.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
198.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
197.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
194.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
190.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
190.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
189.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
189.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
189.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
189.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
188.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
187.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
187.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
186.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
186.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
185.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
185.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
182.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
182.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
182.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
181.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
180.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
178.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
177.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
176.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
176.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
175.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
174.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
174.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
173.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
173.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
172.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
172.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
170.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
169.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
168.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
168.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
168.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
166.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
165.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
164.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
163.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
162.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
162.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
161.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
161.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
160.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
158.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
157.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
157.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
156.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
155.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
154.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
153.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
152.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
151.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
150.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
150.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
150.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
149.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
149.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
149.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
149.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
148.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
147.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
147.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
146.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
145.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
145.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
143.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
142.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
141.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
141.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
138.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
137.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
136.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
136.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
134.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
131.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
131.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
130.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
129.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
126.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
124.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
122.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
118.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
117.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
116.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
116.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
116.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
115.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
113.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
110.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
107.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
103.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
97.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
97.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
96.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
92.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
76.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
10.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
221.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 221.4
Samples: 4
Max nTPM: 269.6
Min nTPM: 200.6
Sample A
Male
200.6
Sample B
Male
212.7
Sample C
Female
269.6
Sample D
Female
202.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.