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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
115.8
nTPM
GTEx:
115.8
nTPM
FANTOM5:
81.6
Scaled Tags Per Million
Pig:
58.7
nTPM
Mouse:
180.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
115.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 115.8
Samples: 105
Max nTPM: 165.3
Min nTPM: 55.2
Std nTPM: 20.7
Median nTPM:
162_1
79 years, female
165.3
491_1
89 years, female
162.1
99_1
64 years, male
158.3
142_1
61 years, female
152.9
119_1
70 years, female
151.1
447_1
81 years, male
149.0
490_1
67 years, female
145.7
117_1
61 years, male
144.8
139_1
64 years, female
144.1
315_1
62 years, female
143.2
415_1
77 years, female
143.0
35_1
74 years, female
142.2
347_1
72 years, male
140.2
32_1
67 years, male
139.1
42_1
85 years, male
138.9
109_1
81 years, female
138.5
266_1
85 years, male
137.5
149_1
88 years, male
135.4
89_1
63 years, male
135.3
41_1
94 years, female
134.1
317_1
60 years, male
133.4
313_1
79 years, female
133.2
396_1
62 years, male
131.0
324_1
76 years, male
130.9
115_1
83 years, male
130.8
81_1
67 years, male
130.6
43_1
64 years, female
130.3
308_1
70 years, female
129.5
6_1
73 years, female
129.3
379_1
60 years, male
129.1
414_1
84 years, female
128.9
217_1
76 years, male
128.1
413_1
59 years, female
128.0
17_1
71 years, male
127.3
404_1
82 years, female
126.5
348_1
84 years, male
126.1
495_1
57 years, female
126.1
229_1
69 years, female
126.0
307_1
66 years, female
125.1
499_1
55 years, female
123.6
120_1
70 years, female
123.2
375_1
74 years, female
123.2
126_1
63 years, male
123.1
173_1
67 years, male
123.0
145_1
84 years, male
122.6
466_1
57 years, female
122.3
137_1
83 years, male
122.1
468_1
89 years, male
120.3
153_1
70 years, female
118.3
311_1
78 years, male
117.4
322_1
76 years, male
117.3
386_1
76 years, male
116.7
389_1
86 years, female
116.5
355_1
70 years, female
113.6
265_1
87 years, male
112.4
18_1
88 years, male
112.1
405_1
91 years, male
112.1
9_1
66 years, female
112.0
384_1
83 years, male
112.0
246_1
77 years, male
111.4
286_1
68 years, female
111.3
189_1
76 years, male
110.9
501_1
88 years, male
109.9
2_1
77 years, female
108.1
354_1
81 years, female
107.9
314_1
67 years, male
107.7
349_1
83 years, male
107.6
352_1
62 years, male
107.6
291_1
76 years, male
105.9
237_1
82 years, male
105.6
254_1
77 years, female
105.2
350_1
84 years, female
105.1
526_1
61 years, male
104.5
288_1
66 years, female
103.3
321_1
62 years, female
103.3
335_1
73 years, female
102.9
264_1
73 years, female
102.8
394_1
75 years, female
101.2
172_1
72 years, female
99.6
251_1
78 years, male
99.2
318_1
68 years, male
98.9
351_1
91 years, male
98.9
518_1
75 years, female
97.7
243_1
75 years, male
96.8
452_1
88 years, female
96.8
292_1
71 years, male
95.5
480_1
63 years, male
95.5
320_1
89 years, female
95.1
503_1
68 years, male
94.0
319_1
81 years, male
93.8
517_1
88 years, male
93.6
406_1
79 years, male
90.8
316_1
62 years, male
89.2
218_1
71 years, female
88.8
4_1
88 years, female
88.1
506_1
65 years, male
88.0
425_1
59 years, female
86.8
295_1
61 years, female
86.4
376_1
75 years, female
86.4
356_1
87 years, female
82.8
377_1
82 years, female
81.6
177_1
74 years, male
81.1
353_1
82 years, female
80.6
293_1
68 years, female
79.8
163_1
78 years, male
55.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.