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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
76.8
nTPM
HPA Brain:
74.1
nTPM
GTEx:
76.8
nTPM
FANTOM5:
114.0
Scaled Tags Per Million
Pig:
49.6
nTPM
Mouse:
74.1
nTPM
Allen mouse:
8.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.1
Sample id
Sample description
nTPM
Amygdala nTPM: 74.1
2695
Female, age 67, right hemisphere
88.5
2514
Male, age 75, right hemisphere
73.9
2814
Male, age 76, right hemisphere
73.2
2517
Female, age 94, left hemisphere
70.0
1987
Female, age 91, left hemisphere
65.1
Basal amygdala nTPM: 68.7
2827
Female, age 67, right hemisphere
79.8
2609
Male, age 75, right hemisphere
74.3
2110
Male, age 80, left hemisphere
68.6
1955
Male, age 76, both hemispheres
64.5
2685
Female, age 94, left hemisphere
64.4
2243
Female, age 91, right hemisphere
60.8
Central amygdala nTPM: 72.6
2826
Female, age 94, left hemisphere
83.0
1905
Male, age 76, both hemispheres
75.1
2515
Male, age 75, right hemisphere
69.6
2239
Male, age 80, left hemisphere
67.8
2701
Female, age 91, right hemisphere
67.8
Corticomedial amygdala nTPM: 66.6
2428
Male, age 75, right hemisphere
72.4
2829
Male, age 80, left hemisphere
69.5
2240
Male, age 76, both hemispheres
66.5
2535
Female, age 67, right hemisphere
66.5
2429
Female, age 94, left hemisphere
62.7
2242
Female, age 91, right hemisphere
61.8
Lateral amygdala nTPM: 74.0
2830
Female, age 67, right hemisphere
91.5
2516
Male, age 75, right hemisphere
80.1
2534
Female, age 94, left hemisphere
72.0
1883
Male, age 76, both hemispheres
71.0
2256
Male, age 80, left hemisphere
66.9
2255
Female, age 91, right hemisphere
62.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 76.8
Samples: 152
Max nTPM: 112.7
Min nTPM: 58.5
Std nTPM: 11.0
Median nTPM: 74.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
112.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
111.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
104.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
102.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
100.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
100.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
100.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
99.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
97.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
96.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
95.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
93.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
93.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
93.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
92.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
92.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
91.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
91.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
91.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
91.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
91.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
91.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
90.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
90.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
90.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
89.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
88.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
87.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
85.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
85.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
85.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
85.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
84.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
84.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
83.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
83.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
83.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
83.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
83.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
82.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
82.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
82.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
81.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
81.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
81.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
80.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
80.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
79.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
79.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
79.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
79.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
79.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
79.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
78.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
78.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
77.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
77.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
77.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
77.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
76.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
76.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
76.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
76.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
75.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
75.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
75.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
75.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
75.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
74.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
74.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
74.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
74.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
74.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
74.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
74.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
74.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
74.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
74.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
74.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
74.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
73.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
73.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
73.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
73.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
73.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
73.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
73.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
73.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
73.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
73.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
72.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
72.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
72.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
72.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
72.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
72.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
71.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
71.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
71.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
71.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
71.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
71.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
71.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
70.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
70.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
70.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
70.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
70.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
69.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
69.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
69.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
69.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
69.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
69.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
68.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
68.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
68.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
68.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
67.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
67.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
67.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
67.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
67.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
66.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
66.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
66.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
66.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
66.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
66.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
65.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
65.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
65.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
65.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
65.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
64.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
64.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
64.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
64.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
64.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
64.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
64.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
64.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
63.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
63.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
61.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
61.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
60.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
60.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
59.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
59.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
58.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
58.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 74.1
Samples: 4
Max nTPM: 80.8
Min nTPM: 62.3
Sample A
Male
62.3
Sample B
Male
79.1
Sample C
Female
80.8
Sample D
Female
74.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.