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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
196.5
nTPM
GTEx:
196.5
nTPM
FANTOM5:
609.3
Scaled Tags Per Million
Pig:
22.8
nTPM
Mouse:
22.1
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
196.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 196.5
Samples: 105
Max nTPM: 408.6
Min nTPM: 30.9
Std nTPM: 95.0
Median nTPM:
389_1
86 years, female
408.6
295_1
61 years, female
392.9
353_1
82 years, female
379.3
351_1
91 years, male
374.1
452_1
88 years, female
363.6
4_1
88 years, female
351.4
189_1
76 years, male
350.3
137_1
83 years, male
347.1
319_1
81 years, male
341.9
314_1
67 years, male
327.9
173_1
67 years, male
320.2
349_1
83 years, male
319.9
386_1
76 years, male
317.2
354_1
81 years, female
316.8
394_1
75 years, female
310.6
320_1
89 years, female
307.0
41_1
94 years, female
298.5
17_1
71 years, male
297.0
109_1
81 years, female
296.7
384_1
83 years, male
296.2
350_1
84 years, female
295.2
18_1
88 years, male
292.7
518_1
75 years, female
292.1
218_1
71 years, female
287.6
315_1
62 years, female
283.3
501_1
88 years, male
281.6
254_1
77 years, female
279.5
243_1
75 years, male
276.0
379_1
60 years, male
269.8
291_1
76 years, male
267.8
335_1
73 years, female
259.9
264_1
73 years, female
259.2
145_1
84 years, male
257.2
288_1
66 years, female
249.1
117_1
61 years, male
247.8
99_1
64 years, male
240.4
265_1
87 years, male
237.9
526_1
61 years, male
235.7
375_1
74 years, female
230.9
307_1
66 years, female
229.7
415_1
77 years, female
228.1
376_1
75 years, female
222.3
317_1
60 years, male
217.1
318_1
68 years, male
211.9
490_1
67 years, female
211.5
162_1
79 years, female
207.5
120_1
70 years, female
204.9
43_1
64 years, female
202.8
491_1
89 years, female
201.9
517_1
88 years, male
196.5
503_1
68 years, male
196.4
313_1
79 years, female
194.1
347_1
72 years, male
193.9
6_1
73 years, female
192.3
466_1
57 years, female
186.6
352_1
62 years, male
185.9
32_1
67 years, male
181.6
324_1
76 years, male
181.5
348_1
84 years, male
177.9
217_1
76 years, male
162.2
322_1
76 years, male
160.1
9_1
66 years, female
153.8
229_1
69 years, female
150.7
405_1
91 years, male
148.4
414_1
84 years, female
145.8
251_1
78 years, male
144.8
42_1
85 years, male
144.0
308_1
70 years, female
142.0
506_1
65 years, male
139.0
447_1
81 years, male
136.2
396_1
62 years, male
134.5
35_1
74 years, female
133.7
142_1
61 years, female
130.3
355_1
70 years, female
126.8
406_1
79 years, male
126.1
139_1
64 years, female
122.0
149_1
88 years, male
121.5
115_1
83 years, male
116.1
425_1
59 years, female
115.3
292_1
71 years, male
112.6
172_1
72 years, female
110.0
286_1
68 years, female
108.6
316_1
62 years, male
104.3
119_1
70 years, female
104.1
495_1
57 years, female
102.5
153_1
70 years, female
101.1
377_1
82 years, female
95.6
404_1
82 years, female
89.8
499_1
55 years, female
89.2
321_1
62 years, female
87.5
293_1
68 years, female
87.3
468_1
89 years, male
87.3
237_1
82 years, male
82.7
81_1
67 years, male
79.5
480_1
63 years, male
78.8
126_1
63 years, male
77.3
266_1
85 years, male
70.8
311_1
78 years, male
65.4
177_1
74 years, male
62.8
2_1
77 years, female
60.3
163_1
78 years, male
55.5
89_1
63 years, male
55.0
246_1
77 years, male
54.5
356_1
87 years, female
41.5
413_1
59 years, female
30.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.