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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
72.1
nTPM
HPA Brain:
88.7
nTPM
GTEx:
72.1
nTPM
FANTOM5:
127.9
Scaled Tags Per Million
Pig:
34.9
nTPM
Mouse:
19.2
nTPM
Allen mouse:
3.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
88.7
Sample id
Sample description
nTPM
Amygdala nTPM: 86.7
1987
Female, age 91, left hemisphere
104.8
2514
Male, age 75, right hemisphere
97.0
2695
Female, age 67, right hemisphere
93.8
2814
Male, age 76, right hemisphere
76.3
2517
Female, age 94, left hemisphere
61.8
Basal amygdala nTPM: 63.9
2827
Female, age 67, right hemisphere
135.8
2110
Male, age 80, left hemisphere
60.9
1955
Male, age 76, both hemispheres
58.3
2609
Male, age 75, right hemisphere
57.4
2685
Female, age 94, left hemisphere
44.1
2243
Female, age 91, right hemisphere
26.7
Central amygdala nTPM: 62.6
2826
Female, age 94, left hemisphere
80.2
1905
Male, age 76, both hemispheres
75.4
2515
Male, age 75, right hemisphere
70.8
2701
Female, age 91, right hemisphere
45.0
2239
Male, age 80, left hemisphere
41.7
Corticomedial amygdala nTPM: 54.7
2535
Female, age 67, right hemisphere
80.0
2428
Male, age 75, right hemisphere
69.8
2240
Male, age 76, both hemispheres
53.0
2429
Female, age 94, left hemisphere
48.5
2242
Female, age 91, right hemisphere
38.8
2829
Male, age 80, left hemisphere
38.3
Lateral amygdala nTPM: 88.7
2830
Female, age 67, right hemisphere
216.6
2516
Male, age 75, right hemisphere
76.4
2256
Male, age 80, left hemisphere
76.3
2534
Female, age 94, left hemisphere
68.2
1883
Male, age 76, both hemispheres
58.8
2255
Female, age 91, right hemisphere
36.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 72.1
Samples: 152
Max nTPM: 374.0
Min nTPM: 10.6
Std nTPM: 56.6
Median nTPM: 55.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
374.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
306.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
265.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
260.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
244.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
235.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
178.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
159.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
154.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
154.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
153.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
146.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
144.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
143.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
141.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
139.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
136.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
135.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
131.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
124.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
116.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
116.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
113.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
111.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
108.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
107.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
106.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
105.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
105.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
104.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
102.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
101.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
98.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
98.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
98.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
96.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
92.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
92.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
91.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
91.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
86.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
85.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
77.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
76.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
75.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
75.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
73.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
72.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
72.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
72.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
72.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
70.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
69.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
69.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
68.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
68.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
68.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
65.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
65.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
65.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
64.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
64.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
64.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
63.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
63.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
62.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
60.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
59.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
59.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
58.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
57.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
56.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
56.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
55.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
55.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
55.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
54.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
54.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
54.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
53.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
53.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
52.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
52.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
52.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
52.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
51.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
51.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
49.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
48.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
48.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
48.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
48.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
47.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
47.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
47.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
46.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
46.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
45.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
45.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
44.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
44.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
43.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
42.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
41.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
41.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
41.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
41.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
41.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
40.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
39.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
37.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
36.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
35.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
34.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
34.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
34.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
34.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
34.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
33.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
32.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
31.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
30.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
28.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
28.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
27.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
26.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
25.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
24.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
24.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
23.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
23.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
22.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
22.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
22.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
20.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
19.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
19.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
19.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
18.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
17.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
17.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
15.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
15.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
14.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
12.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
12.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
10.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
19.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 19.3
Samples: 4
Max nTPM: 24.5
Min nTPM: 10.7
Sample A
Male
21.9
Sample B
Male
24.5
Sample C
Female
10.7
Sample D
Female
19.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.