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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
55.8
nTPM
HPA Brain:
22.6
nTPM
GTEx:
55.8
nTPM
FANTOM5:
52.8
Scaled Tags Per Million
Pig:
45.6
nTPM
Mouse:
44.2
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
22.6
Sample id
Sample description
nTPM
Amygdala nTPM: 14.4
2517
Female, age 94, left hemisphere
22.2
2514
Male, age 75, right hemisphere
14.6
2814
Male, age 76, right hemisphere
14.1
1987
Female, age 91, left hemisphere
13.6
2695
Female, age 67, right hemisphere
7.3
Basal amygdala nTPM: 22.6
2685
Female, age 94, left hemisphere
27.2
2243
Female, age 91, right hemisphere
27.1
2110
Male, age 80, left hemisphere
24.6
2827
Female, age 67, right hemisphere
20.0
2609
Male, age 75, right hemisphere
19.7
1955
Male, age 76, both hemispheres
16.8
Central amygdala nTPM: 17.3
2826
Female, age 94, left hemisphere
28.0
2239
Male, age 80, left hemisphere
19.6
2701
Female, age 91, right hemisphere
16.2
1905
Male, age 76, both hemispheres
11.7
2515
Male, age 75, right hemisphere
11.1
Corticomedial amygdala nTPM: 21.3
2829
Male, age 80, left hemisphere
26.9
2429
Female, age 94, left hemisphere
25.9
2242
Female, age 91, right hemisphere
20.2
2535
Female, age 67, right hemisphere
20.2
2428
Male, age 75, right hemisphere
19.3
2240
Male, age 76, both hemispheres
15.1
Lateral amygdala nTPM: 16.4
2534
Female, age 94, left hemisphere
31.7
2516
Male, age 75, right hemisphere
15.4
2830
Female, age 67, right hemisphere
14.7
1883
Male, age 76, both hemispheres
13.8
2255
Female, age 91, right hemisphere
12.5
2256
Male, age 80, left hemisphere
10.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 55.8
Samples: 152
Max nTPM: 221.9
Min nTPM: 10.4
Std nTPM: 29.8
Median nTPM: 49.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
221.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
173.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
158.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
151.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
118.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
118.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
108.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
104.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
99.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
96.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
95.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
94.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
94.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
92.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
89.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
89.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
86.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
84.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
84.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
82.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
79.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
77.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
76.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
76.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
76.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
75.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
75.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
75.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
74.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
72.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
72.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
72.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
70.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
70.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
70.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
69.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
69.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
68.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
68.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
68.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
68.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
66.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
66.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
66.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
66.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
65.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
65.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
65.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
64.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
64.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
63.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
61.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
60.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
60.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
60.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
59.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
59.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
59.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
58.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
57.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
57.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
57.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
56.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
56.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
56.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
55.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
55.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
53.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
52.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
52.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
51.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
51.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
51.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
49.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
49.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
49.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
48.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
47.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
47.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
45.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
45.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
45.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
44.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
44.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
44.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
44.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
43.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
43.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
43.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
43.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
42.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
42.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
41.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
41.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
41.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
40.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
38.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
38.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
38.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
38.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
37.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
37.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
37.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
37.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
37.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
36.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
36.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
36.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
35.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
35.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
34.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
34.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
33.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
33.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
33.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
33.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
32.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
32.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
32.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
31.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
31.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
31.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
30.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
30.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
29.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
29.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
29.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
28.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
27.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
27.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
26.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
26.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
26.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
25.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
25.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
25.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
24.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
23.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
22.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
22.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
21.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
17.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
15.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
10.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
