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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
27.7
nTPM
HPA Brain:
21.0
nTPM
GTEx:
27.7
nTPM
FANTOM5:
15.1
Scaled Tags Per Million
Pig:
1.9
nTPM
Mouse:
8.6
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.0
Sample id
Sample description
nTPM
Amygdala nTPM: 21.0
2814
Male, age 76, right hemisphere
29.3
2695
Female, age 67, right hemisphere
28.1
2514
Male, age 75, right hemisphere
18.0
1987
Female, age 91, left hemisphere
17.5
2517
Female, age 94, left hemisphere
12.1
Basal amygdala nTPM: 14.8
1955
Male, age 76, both hemispheres
22.9
2609
Male, age 75, right hemisphere
18.1
2243
Female, age 91, right hemisphere
15.1
2110
Male, age 80, left hemisphere
11.6
2685
Female, age 94, left hemisphere
11.2
2827
Female, age 67, right hemisphere
9.6
Central amygdala nTPM: 19.7
1905
Male, age 76, both hemispheres
29.3
2515
Male, age 75, right hemisphere
22.2
2826
Female, age 94, left hemisphere
17.4
2701
Female, age 91, right hemisphere
16.1
2239
Male, age 80, left hemisphere
13.7
Corticomedial amygdala nTPM: 15.9
2240
Male, age 76, both hemispheres
21.6
2428
Male, age 75, right hemisphere
21.4
2242
Female, age 91, right hemisphere
17.2
2429
Female, age 94, left hemisphere
14.2
2829
Male, age 80, left hemisphere
12.8
2535
Female, age 67, right hemisphere
8.5
Lateral amygdala nTPM: 17.3
1883
Male, age 76, both hemispheres
26.2
2516
Male, age 75, right hemisphere
20.8
2255
Female, age 91, right hemisphere
16.9
2830
Female, age 67, right hemisphere
13.8
2534
Female, age 94, left hemisphere
13.3
2256
Male, age 80, left hemisphere
12.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
27.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 27.7
Samples: 152
Max nTPM: 120.2
Min nTPM: 9.6
Std nTPM: 16.0
Median nTPM: 24.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
120.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
96.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
87.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
87.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
77.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
68.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
58.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
55.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
50.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
49.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
46.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
44.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
43.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
42.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
42.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
41.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
40.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
40.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
39.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
39.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
38.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
36.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
36.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
36.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
35.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
35.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
35.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
35.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
34.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
33.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
33.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
32.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
32.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
32.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
31.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
31.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
31.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
31.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
30.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
30.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
30.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
30.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
30.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
29.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
29.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
29.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
28.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
28.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
28.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
28.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
28.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
27.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
27.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
27.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
27.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
27.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
26.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
26.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
26.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
26.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
26.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
25.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
25.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
25.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
25.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
25.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
25.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
25.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
25.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
24.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
24.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
24.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
24.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
24.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
24.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
24.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
24.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
24.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
24.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
23.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
23.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
22.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
22.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
22.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
22.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
22.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
22.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
22.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
22.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
22.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
22.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
21.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
21.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
21.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
21.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
21.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
21.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
21.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
21.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
20.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
20.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
20.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
20.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
20.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
20.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
20.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
20.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
20.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
20.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
19.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
19.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
19.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
19.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
19.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
19.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
18.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
18.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
18.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
18.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
18.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
17.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
17.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
16.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
16.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
15.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
15.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
15.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
15.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
15.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
15.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
15.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
14.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
14.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
14.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
14.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
14.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
13.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
13.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
13.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
12.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
12.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
12.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
12.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
12.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
12.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
11.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
11.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
10.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
10.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
10.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
9.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
8.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 8.6
Samples: 4
Max nTPM: 13.4
Min nTPM: 4.3
Sample A
Male
4.3
Sample B
Male
6.0
Sample C
Female
10.8
Sample D
Female
13.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.