HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:61.5 nTPM
HPA Brain:30.2 nTPM
GTEx:61.5 nTPM
FANTOM5:73.4 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:106.8 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004126
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 30.2
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
1898 Male, age 80, left hemisphere 36.7
2529 Female, age 94, left hemisphere 36.7
1855 Male, age 76, left hemisphere 27.1
2148 Female, age 91, left hemisphere 26.7
1911 Female, age 85, right hemisphere 25.6
2621 Female, age 67, right hemisphere 24.6
Dentate gyrus
nTPM: 26.3
1927 Female, age 91, both hemispheres 31.7
2010 Male, age 76, both hemispheres 30.7
2530 Female, age 94, left hemisphere 30.0
2246 Female, age 85, both hemispheres 23.8
2528 Male, age 74, both hemispheres 23.2
2531 Female, age 67, both hemispheres 18.4
Entorhinal gyrus
nTPM: 24.5
1787 Male, age 76, left hemisphere 28.4
2117 Female, age 91, right hemisphere 27.1
2764 Male, age 80, right hemisphere 27.0
1938 Female, age 85, left hemisphere 26.5
2686 Male, age 75, right hemisphere 19.2
2613 Female, age 94, left hemisphere 19.0
Hippocampus, CA1
nTPM: 28.5
2527 Male, age 74, both hemispheres 33.2
2749 Male, age 80, left hemisphere 33.0
2082 Female, age 91, right hemisphere 27.4
1873 Female, age 85, both hemispheres 26.9
2045 Male, age 76, both hemispheres 22.1
Hippocampus, CA2
nTPM: 30.2
1892 Male, age 76, both hemispheres 33.6
2249 Male, age 74, both hemispheres 33.3
1963 Male, age 80, left hemisphere 31.4
2437 Female, age 94, left hemisphere 27.8
1940 Female, age 85, left hemisphere 27.5
2113 Female, age 91, right hemisphere 27.4
Hippocampus, CA3
nTPM: 26.0
2436 Male, age 74, both hemispheres 30.1
1867 Male, age 76, both hemispheres 29.8
2137 Male, age 80, left hemisphere 27.3
1891 Female, age 85, both hemispheres 26.7
2620 Female, age 94, left hemisphere 22.0
2861 Female, age 67, both hemispheres 20.1
Parahippocampal cortex
nTPM: 25.1
2250 Female, age 67, right hemisphere 31.7
1850 Male, age 80, both hemispheres 27.9
2018 Male, age 76, both hemispheres 27.8
2245 Female, age 91, both hemispheres 27.6
1933 Female, age 85, both hemispheres 26.9
1990 Female, age 91, right hemisphere 26.9
2622 Female, age 67, right hemisphere 21.6
2532 Female, age 72, left hemisphere 21.5
2692 Male, age 74, both hemispheres 21.0
2693 Female, age 94, both hemispheres 18.4
Perirhinal gyrus
nTPM: 27.8
1847 Female, age 91, left hemisphere 33.9
1794 Male, age 80, right hemisphere 31.3
1841 Female, age 85, right hemisphere 28.0
2521 Female, age 94, right hemisphere 23.8
2848 Male, age 76, right hemisphere 22.1
Subiculum
nTPM: 26.3
1901 Male, age 80, both hemispheres 28.1
2619 Male, age 74, both hemispheres 27.8
1977 Female, age 85, both hemispheres 27.7
2729 Female, age 91, right hemisphere 26.2
2042 Male, age 76, both hemispheres 24.0
2438 Female, age 94, left hemisphere 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 61.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.5
Samples: 197

Max nTPM: 161.0
Min nTPM: 31.5
Std nTPM: 18.0
Median nTPM: 58.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 161.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 128.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 116.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 109.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 107.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 107.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 102.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 101.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 99.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 98.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 73.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.4
FF:10169-103B7 60 years, female 93.4
FF:10153-102I9 76 years, female 53.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.2
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 20.2
Min nTPM: 13.8
Sample A Female 20.2
Sample B Female 14.6
Sample C Male 15.4
Sample D Male 13.8
Dorsal hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 23.9
Min nTPM: 14.4
Sample A Female 23.9
Sample B Female 18.5
Sample C Male 19.9
Sample D Male 14.4
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.9
Sample A Female 17.4
Sample B Female 19.3
Sample C Male 16.0
Sample D Male 13.9
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.1
Sample A Female 16.0
Sample B Female 13.1
Sample C Male 19.4
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 106.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.4
Samples: 4

Max nTPM: 105.2
Min nTPM: 98.0
Sample A Male 102.9
Sample B Male 98.0
Sample C Female 103.6
Sample D Female 105.2
Hippocampal formation
nTPM: 106.8
Samples: 4

Max nTPM: 117.1
Min nTPM: 101.0
Sample A Male 101.0
Sample B Male 101.6
Sample C Female 117.1
Sample D Female 107.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
70546111 Antisense, RP_050623_03_F04, Mouse strain C57BL/6J (56 days, male) 1.5

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