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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
160.9
nTPM
GTEx:
160.9
nTPM
FANTOM5:
45.0
Scaled Tags Per Million
Pig:
105.6
nTPM
Mouse:
5.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
160.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 160.9
Samples: 105
Max nTPM: 284.2
Min nTPM: 80.1
Std nTPM: 35.9
Median nTPM:
375_1
74 years, female
284.2
42_1
85 years, male
276.4
379_1
60 years, male
246.5
142_1
61 years, female
228.6
99_1
64 years, male
225.6
35_1
74 years, female
223.7
347_1
72 years, male
216.1
319_1
81 years, male
212.5
414_1
84 years, female
210.3
237_1
82 years, male
209.3
394_1
75 years, female
201.1
172_1
72 years, female
197.2
117_1
61 years, male
194.0
115_1
83 years, male
193.9
218_1
71 years, female
193.2
396_1
62 years, male
190.8
243_1
75 years, male
190.6
415_1
77 years, female
190.6
6_1
73 years, female
188.8
352_1
62 years, male
187.4
384_1
83 years, male
186.8
137_1
83 years, male
186.4
4_1
88 years, female
186.3
177_1
74 years, male
184.8
120_1
70 years, female
184.6
503_1
68 years, male
182.8
109_1
81 years, female
181.3
229_1
69 years, female
181.0
41_1
94 years, female
180.5
119_1
70 years, female
179.5
389_1
86 years, female
178.7
447_1
81 years, male
178.3
324_1
76 years, male
177.5
413_1
59 years, female
176.2
313_1
79 years, female
174.8
266_1
85 years, male
174.0
153_1
70 years, female
173.9
356_1
87 years, female
173.8
162_1
79 years, female
173.1
376_1
75 years, female
172.0
173_1
67 years, male
171.8
355_1
70 years, female
171.6
499_1
55 years, female
170.7
126_1
63 years, male
170.2
349_1
83 years, male
169.4
189_1
76 years, male
168.3
286_1
68 years, female
167.0
506_1
65 years, male
167.0
354_1
81 years, female
165.8
32_1
67 years, male
164.0
9_1
66 years, female
163.5
526_1
61 years, male
163.4
315_1
62 years, female
162.0
246_1
77 years, male
157.9
404_1
82 years, female
157.8
490_1
67 years, female
157.7
452_1
88 years, female
156.3
17_1
71 years, male
156.1
425_1
59 years, female
155.1
316_1
62 years, male
154.6
163_1
78 years, male
154.2
386_1
76 years, male
150.7
265_1
87 years, male
150.5
145_1
84 years, male
147.4
81_1
67 years, male
145.3
406_1
79 years, male
144.6
377_1
82 years, female
144.5
318_1
68 years, male
144.4
314_1
67 years, male
143.2
264_1
73 years, female
142.5
254_1
77 years, female
142.3
139_1
64 years, female
141.6
311_1
78 years, male
139.5
468_1
89 years, male
139.0
292_1
71 years, male
137.9
518_1
75 years, female
137.1
405_1
91 years, male
137.0
321_1
62 years, female
135.0
335_1
73 years, female
134.1
317_1
60 years, male
133.6
350_1
84 years, female
133.1
307_1
66 years, female
132.4
295_1
61 years, female
131.6
43_1
64 years, female
129.6
353_1
82 years, female
126.1
348_1
84 years, male
124.3
480_1
63 years, male
124.0
293_1
68 years, female
122.7
351_1
91 years, male
121.8
89_1
63 years, male
120.5
18_1
88 years, male
120.4
517_1
88 years, male
120.2
251_1
78 years, male
120.1
501_1
88 years, male
119.9
320_1
89 years, female
116.7
217_1
76 years, male
115.3
288_1
66 years, female
114.0
291_1
76 years, male
113.8
2_1
77 years, female
112.8
466_1
57 years, female
109.4
308_1
70 years, female
109.3
491_1
89 years, female
108.3
322_1
76 years, male
107.2
149_1
88 years, male
98.4
495_1
57 years, female
80.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.