We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KNG1 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.63
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
2.1e-7
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
58%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
24%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1157.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
4597.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4358.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4328.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
4101.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4065.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4016.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3957.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
3795.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3779.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3762.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
3518.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3453.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3224.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3188.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
3052.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
3005.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2978.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2918.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
2910.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2871.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
2828.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2792.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2674.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2632.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2565.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
2549.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2470.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
2452.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
2451.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
2396.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2343.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2322.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2296.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
2233.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2217.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2212.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
2210.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2209.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
2195.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2192.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2170.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
2168.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
2147.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2137.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2118.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2116.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
2098.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2080.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2045.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
2029.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
2018.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2012.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
2009.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2008.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2002.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1991.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1943.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1926.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1920.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1920.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1915.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1878.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1877.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1872.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1867.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1851.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1824.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1822.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1822.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1818.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1813.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
1810.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1806.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1756.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1756.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1753.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1680.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1672.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1645.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1641.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1636.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1630.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1628.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1623.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1622.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1613.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1613.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1604.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1602.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1580.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1557.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1542.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1536.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1515.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1496.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1492.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1488.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1485.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1483.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1477.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1468.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1464.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1457.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1452.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1430.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1421.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1419.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1404.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1404.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1403.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1399.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1386.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1365.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1356.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1356.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1347.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1335.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1328.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1305.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1304.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1296.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1292.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1285.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1284.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1283.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1271.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
1262.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
1256.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1241.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1234.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1234.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1231.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1230.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1228.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1217.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1208.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1196.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1196.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1193.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1180.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1175.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1172.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1172.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1152.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
1150.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1150.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1146.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1143.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1135.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1115.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1107.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1106.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1104.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1104.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1101.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1094.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1093.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1093.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1088.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1085.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1080.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1075.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1074.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1058.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1057.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1056.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1048.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1047.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1046.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1044.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1042.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1041.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1027.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1008.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1007.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1001.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
996.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
991.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
989.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
989.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
985.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
980.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
977.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
969.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
969.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
963.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
963.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
958.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
957.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
956.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
949.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
946.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
937.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
928.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
918.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
917.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
916.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
912.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
910.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
907.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
902.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
899.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
896.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
893.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
884.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
884.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
871.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
868.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
856.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
854.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
853.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
849.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
849.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
849.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
848.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
844.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
841.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
838.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
838.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
838.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
837.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
834.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
827.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
817.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
815.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
814.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
807.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
798.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
797.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
796.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
788.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
786.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
782.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
780.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
780.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
777.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
766.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
765.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
762.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
750.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
739.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
731.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
722.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
713.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
712.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
712.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
705.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
702.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
699.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
695.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
691.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
677.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
675.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
671.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
669.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
666.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
658.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
649.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
637.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
635.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
629.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
628.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
626.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
608.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
598.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
580.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
573.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
569.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
568.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
564.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
561.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
559.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
555.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
552.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
541.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
535.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
534.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
523.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
515.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
514.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
514.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
506.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
502.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
489.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
487.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
474.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
472.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
470.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
468.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
446.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
412.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
412.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
411.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
392.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
388.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
371.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
370.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
363.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
361.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
339.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
336.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
329.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
327.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
319.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
317.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
312.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
310.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
300.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
297.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
291.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
287.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
259.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
255.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
247.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
241.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
239.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
230.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
224.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
223.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
223.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
207.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
202.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
195.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
187.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
185.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
185.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
184.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
182.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
179.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
175.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
170.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
165.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
131.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
128.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
117.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
116.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
106.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
102.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
93.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
85.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
76.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
61.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
58.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
57.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
55.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
46.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
45.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
45.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
42.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
33.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
24.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
16.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KNG1 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 2.14
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.00023
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
0%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
48%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1184.3
Number of samples
231
Samples
Sample
Description
TPM
DO45237
0 years, male, NA, stage:2, alive, 900 days
5369.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3952.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
3890.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
3509.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
3346.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3296.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
3205.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3054.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
2932.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
2888.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2794.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
2771.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2709.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
2675.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2671.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
2646.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
2636.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
2545.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
2472.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2443.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
2398.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
2355.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
2318.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
2281.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
2252.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
2242.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
2224.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2219.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
2203.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
2163.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2141.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
2128.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
2123.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
2069.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
2065.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
1993.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1944.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1915.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
1911.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1908.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1833.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
1814.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
1786.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
1783.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1725.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1722.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
1715.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
1710.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
1697.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
1672.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
1660.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1643.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
1642.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
1640.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
1630.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1615.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1601.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1590.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
1588.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
1587.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
1578.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
1563.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
1558.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
1554.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
1534.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1530.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1516.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
1511.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
1497.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
1492.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1490.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
1487.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
1483.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
1481.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
1477.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
1475.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
1460.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
1448.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
1434.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
1424.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
1422.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
1421.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
1412.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
1401.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1381.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1377.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
1375.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1365.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
1358.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
1353.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1335.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1321.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
1291.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1287.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
1278.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
1269.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
1237.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
1234.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
1220.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
1217.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1204.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
1200.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1195.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
1171.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1171.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
1155.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
1144.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1142.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
1133.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1124.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
1114.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
1107.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
1106.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
1101.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
1088.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
1088.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
1081.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1075.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
1058.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
1052.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1049.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
1026.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1005.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
997.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
994.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
992.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
989.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
979.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
972.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
971.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
966.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
957.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
945.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
938.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
931.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
922.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
911.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
909.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
895.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
885.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
877.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
874.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
872.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
858.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
853.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
851.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
841.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
819.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
817.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
815.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
812.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
800.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
796.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
788.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
780.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
772.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
766.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
765.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
761.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
746.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
740.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
711.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
706.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
699.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
689.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
681.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
678.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
673.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
662.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
649.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
629.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
583.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
571.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
559.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
555.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
533.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
526.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
515.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
510.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
509.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
509.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
489.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
482.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
478.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
452.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
440.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
374.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
373.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
372.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
362.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
314.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
313.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
308.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
291.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
281.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
258.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
223.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
220.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
217.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
200.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
177.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
161.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
154.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
104.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
99.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
93.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
92.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
73.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
71.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
60.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
58.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
38.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
26.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
16.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
15.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
14.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
10.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
10.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
1.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
2.4
863
Tumor
2.1
877
Tumor
2.0
921
Tumor
1.4
777
Tumor
1.4
343
Tumor
1.4
363
Tumor
1.4
487
Tumor
1.3
1027
Tumor
1.3
131
Tumor
1.1
743
Tumor
1.1
785
Tumor
1.1
523
Tumor
1.1
697
Tumor
1.0
741
Tumor
1.0
112
Tumor
0.9
355
Tumor
0.9
517
Tumor
0.9
393
Tumor
0.8
227
Tumor
0.8
1041
Tumor
0.8
813
Tumor
0.7
817
Tumor
0.7
1045
Tumor
0.7
953
Tumor
0.7
471
Tumor
0.7
647
Tumor
0.7
977
Tumor
0.6
737
Tumor
0.6
967
Tumor
0.6
1028
Normal
0.6
713
Tumor
0.6
553
Tumor
0.6
924
Normal
0.6
727
Tumor
0.6
778
Normal
0.5
975
Tumor
0.5
695
Tumor
0.5
192
Normal
0.5
671
Tumor
0.5
257
Tumor
0.5
283
Tumor
0.5
491
Tumor
0.5
545
Tumor
0.5
755
Tumor
0.5
365
Tumor
0.5
223
Tumor
0.5
1025
Tumor
0.4
881
Tumor
0.4
538
Normal
0.4
431
Tumor
0.4
963
Tumor
0.4
515
Tumor
0.4
1043
Tumor
0.4
498
Normal
0.4
915
Tumor
0.4
615
Tumor
0.4
746
Normal
0.4
527
Tumor
0.4
375
Tumor
0.4
883
Tumor
0.4
261
Tumor
0.4
525
Tumor
0.3
461
Tumor
0.3
823
Tumor
0.3
937
Tumor
0.3
524
Normal
0.3
878
Normal
0.3
411
Tumor
0.3
455
Tumor
0.3
141
Tumor
0.3
497
Tumor
0.3
224
Normal
0.3
663
Tumor
0.3
367
Tumor
0.3
685
Tumor
0.3
483
Tumor
0.3
465
Tumor
0.3
1021
Tumor
0.3
923
Tumor
0.3
981
Tumor
0.2
445
Tumor
0.2
744
Normal
0.2
745
Tumor
0.2
857
Tumor
0.2
452
Normal
0.2
341
Tumor
0.2
473
Tumor
0.2
137
Tumor
0.2
477
Tumor
0.2
147
Tumor
0.2
271
Tumor
0.2
463
Tumor
0.2
911
Tumor
0.2
865
Tumor
0.2
474
Normal
0.2
423
Tumor
0.2
125
Tumor
0.1
391
Tumor
0.1
635
Tumor
0.1
966
Normal
0.1
957
Tumor
0.1
665
Tumor
0.1
546
Normal
0.1
142
Normal
0.1
874
Normal
0.1
1022
Normal
0.1
952
Normal
0.1
297
Tumor
0.1
327
Tumor
0.1
618
Normal
0.1
492
Normal
0.0
554
Normal
0.0
364
Normal
0.0
277
Tumor
0.0
861
Tumor
0.0
526
Normal
0.0
563
Tumor
0.0
161
Tumor
0.0
124
Normal
0.0
328
Normal
0.0
964
Normal
0.0
426
Normal
0.0
113
Tumor
0.0
815
Tumor
N/A
867
Tumor
0.0
516
Normal
0.0
493
Tumor
0.0
965
Tumor
0.0
738
Normal
0.0
518
Normal
0.0
228
Normal
0.0
715
Tumor
0.0
922
Normal
0.0
488
Normal
0.0
494
Normal
0.0
696
Normal
0.0
943
Tumor
-0.1
982
Normal
-0.1
111
Normal
-0.1
484
Normal
-0.1
913
Tumor
-0.1
873
Tumor
-0.1
956
Normal
-0.1
217
Tumor
-0.1
1015
Tumor
-0.1
1031
Tumor
-0.1
918
Normal
-0.1
472
Normal
-0.1
742
Normal
-0.1
433
Tumor
-0.1
617
Tumor
-0.1
447
Tumor
-0.1
535
Tumor
-0.1
221
Tumor
-0.1
313
Tumor
-0.1
636
Normal
-0.1
866
Normal
-0.1
938
Normal
-0.1
448
Normal
-0.1
1026
Normal
-0.1
135
Tumor
-0.1
916
Normal
-0.1
412
Normal
-0.1
435
Tumor
-0.1
536
Normal
-0.1
862
Normal
-0.1
728
Normal
-0.1
342
Normal
-0.1
513
Tumor
-0.1
187
Tumor
-0.1
344
Normal
-0.1
627
Tumor
-0.1
444
Normal
-0.1
262
Normal
-0.2
171
Tumor
-0.2
114
Normal
-0.2
917
Tumor
-0.2
955
Tumor
-0.2
951
Tumor
-0.2
285
Tumor
-0.2
786
Normal
-0.2
267
Tumor
-0.2
416
Normal
-0.2
218
Normal
-0.2
286
Normal
-0.2
914
Normal
-0.2
983
Tumor
-0.2
686
Normal
-0.2
415
Tumor
-0.2
1013
Tumor
-0.2
368
Normal
-0.2
816
Normal
-0.2
641
Tumor
-0.2
462
Normal
-0.2
268
Normal
-0.2
851
Tumor
-0.2
421
Tumor
-0.2
968
Normal
-0.2
716
Normal
-0.2
534
Normal
-0.2
185
Tumor
-0.2
723
Tumor
-0.2
464
Normal
-0.2
958
Normal
-0.2
567
Tumor
-0.2
1046
Normal
-0.2
864
Normal
-0.2
386
Normal
-0.2
814
Normal
-0.2
396
Normal
-0.2
186
Normal
-0.3
573
Tumor
-0.3
395
Tumor
-0.3
672
Normal
-0.3
925
Tumor
-0.3
132
Normal
-0.3
383
Tumor
-0.3
976
Normal
-0.3
756
Normal
-0.3
284
Normal
-0.3
258
Normal
-0.3
232
Normal
-0.3
392
Normal
-0.3
136
Normal
-0.3
146
Normal
-0.3
868
Normal
-0.3
698
Normal
-0.3
126
Normal
-0.3
138
Normal
-0.3
468
Normal
-0.3
571
Tumor
-0.3
514
Normal
-0.3
926
Normal
-0.3
481
Tumor
-0.3
954
Normal
-0.3
451
Tumor
-0.3
434
Normal
-0.3
714
Normal
-0.3
188
Normal
-0.3
568
Normal
-0.3
648
Normal
-0.3
311
Tumor
-0.3
212
Normal
-0.3
882
Normal
-0.3
353
Tumor
-0.3
466
Normal
-0.3
722
Normal
-0.3
456
Normal
-0.3
272
Normal
-0.3
356
Normal
-0.3
414
Normal
-0.3
432
Normal
-0.3
376
Normal
-0.4
424
Normal
-0.4
195
Tumor
-0.4
557
Tumor
-0.4
884
Normal
-0.4
528
Normal
-0.4
384
Normal
-0.4
1044
Normal
-0.4
436
Normal
-0.4
1016
Normal
-0.4
196
Normal
-0.4
642
Normal
-0.4
478
Normal
-0.4
574
Normal
-0.4
222
Normal
-0.4
214
Normal
-0.4
357
Tumor
-0.4
533
Tumor
-0.4
148
Normal
-0.4
564
Normal
-0.4
818
Normal
-0.4
394
Normal
-0.4
721
Tumor
-0.4
1042
Normal
-0.4
162
Normal
-0.4
852
Normal
-0.4
428
Normal
-0.4
191
Tumor
-0.4
128
Normal
-0.4
172
Normal
-0.4
422
Normal
-0.4
361
Tumor
-0.5
312
Normal
-0.5
443
Tumor
-0.5
944
Normal
-0.5
467
Tumor
-0.5
331
Tumor
-0.5
662
Normal
-0.5
387
Tumor
-0.5
298
Normal
-0.5
858
Normal
-0.5
482
Normal
-0.5
616
Normal
-0.5
537
Tumor
-0.5
558
Normal
-0.5
912
Normal
-0.5
354
Normal
-0.5
666
Normal
-0.5
362
Normal
-0.5
385
Tumor
-0.5
1032
Normal
-0.5
145
Tumor
-0.5
388
Normal
-0.6
213
Tumor
-0.6
664
Normal
-0.6
123
Tumor
-0.6
824
Normal
-0.6
366
Normal
-0.6
413
Tumor
-0.6
231
Tumor
-0.6
572
Normal
-0.6
628
Normal
-0.7
358
Normal
-0.7
314
Normal
-0.7
446
Normal
-0.7
127
Tumor
-0.7
211
Tumor
-0.7
278
Normal
-0.8
352
Normal
-0.8
984
Normal
-0.8
332
Normal
-0.8
1014
Normal
-0.8
351
Tumor
-0.8
724
Normal
-0.9
427
Tumor
-1.0
978
Normal
-1.0
661
Tumor
-1.3
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.