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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
189.7
nTPM
HPA Brain:
980.0
nTPM
GTEx:
189.7
nTPM
FANTOM5:
1406.8
Scaled Tags Per Million
Pig:
611.2
nTPM
Mouse:
178.9
nTPM
Allen mouse:
10.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
980.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 775.4
1870
Female, age 42, unknown
1009.8
1830
Male, age 51, unknown
986.7
1833
Male, age 53, unknown
969.1
2411
Female, age 72, unknown
856.8
2019
Male, age 18, unknown
826.6
2828
Female, age 72, unknown
739.5
1827
Male, age 72, unknown
628.3
2666
Male, age 74, left hemisphere
621.4
2219
Male, age 76, both hemispheres
575.9
2586
Male, age 75, left hemisphere
539.8
Dorsal raphe nucleus nTPM: 659.0
2750
Male, age 76, both hemispheres
901.1
2016
Female, age 72, unknown
780.7
1828
Male, age 53, unknown
667.1
2047
Male, age 72, unknown
484.4
2298
Female, age 72, unknown
461.6
Inferior colliculus nTPM: 650.6
1848
Female, age 42, unknown
685.3
2849
Male, age 72, unknown
678.1
1890
Male, age 53, unknown
652.9
2097
Female, age 72, unknown
586.0
Median raphe nucleus nTPM: 640.4
2220
Male, age 76, midline
640.4
Periaquaductal grey, anterior nTPM: 510.7
2502
Female, age 75, unknown
553.4
1947
Male, age 18, unknown
543.4
1795
Male, age 51, unknown
435.2
Periaquaductal grey, dorsal nTPM: 607.5
2850
Male, age 76, both hemispheres
772.8
2464
Female, age 72, unknown
641.3
1831
Male, age 72, unknown
558.0
1840
Male, age 53, unknown
457.8
Periaquaductal grey, lateral nTPM: 613.8
2140
Male, age 76, both hemispheres
681.8
2053
Male, age 18, unknown
601.8
2272
Male, age 74, both hemispheres
557.8
Pretectal area nTPM: 606.4
2316
Male, age 76, right hemisphere
778.4
1815
Male, age 53, unknown
741.1
2667
Female, age 75, unknown
697.0
1817
Female, age 42, unknown
637.7
2825
Male, age 18, unknown
616.2
2407
Male, age 75, both hemispheres
609.1
2224
Female, age 72, unknown
586.9
2273
Male, age 74, both hemispheres
586.1
2007
Male, age 72, unknown
530.3
1944
Female, age 72, unknown
484.7
1816
Male, age 51, unknown
402.8
Red nucleus nTPM: 980.0
1865
Male, age 51, unknown
1198.0
1904
Male, age 53, unknown
1158.1
1821
Female, age 72, unknown
1109.7
1954
Female, age 42, unknown
1105.1
2823
Male, age 76, right hemisphere
1069.7
2227
Male, age 72, unknown
1059.6
2503
Female, age 72, unknown
1046.4
2769
Male, age 72, unknown
1042.8
2785
Male, age 18, unknown
922.2
2725
Female, age 75, unknown
759.3
2588
Male, age 74, left hemisphere
722.1
2584
Male, age 75, left hemisphere
566.3
Substantia nigra nTPM: 665.1
2699
Male, age 18, unknown
872.0
2409
Female, age 72, unknown
785.9
1851
Male, age 51, unknown
699.9
2583
Male, age 75, right hemisphere
697.7
1889
Female, age 72, unknown
676.0
2241
Male, age 72, unknown
662.4
2590
Female, age 75, unknown
633.2
1941
Male, age 53, unknown
567.1
1916
Female, age 42, unknown
559.3
2665
Male, age 74, both hemispheres
497.8
Superior colliculus nTPM: 695.7
1913
Female, age 42, unknown
1026.6
1995
Male, age 72, unknown
1008.4
1895
Male, age 76, right hemisphere
784.8
1839
Male, age 51, unknown
722.8
2587
Male, age 74, left hemisphere
714.0
2668
Female, age 75, unknown
689.7
1796
Male, age 53, unknown
552.0
2087
Female, age 72, unknown
524.3
2664
Male, age 75, both hemispheres
492.3
2261
Male, age 18, unknown
441.8
Ventral tegmental area nTPM: 698.0
2223
Female, age 72, unknown
916.3
2410
Female, age 72, unknown
727.7
2218
Male, age 76, both hemispheres
669.8
1942
Male, age 51, unknown
637.4
2021
Male, age 53, unknown
625.7
1915
Female, age 42, unknown
611.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
189.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 189.7
Samples: 139
Max nTPM: 358.6
Min nTPM: 53.4
Std nTPM: 61.7
Median nTPM: 178.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
358.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
357.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
333.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
316.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
316.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
314.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
311.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
309.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
305.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
302.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
301.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
293.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
286.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
285.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
285.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
281.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
277.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
273.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
268.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
268.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
257.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
255.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
246.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
243.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
242.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
242.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
240.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
239.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
236.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
236.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
236.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
233.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
231.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
231.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
231.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
230.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
228.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
225.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
224.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
221.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
215.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
213.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
210.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
208.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
208.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
205.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
204.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
201.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
198.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
198.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
197.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
196.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
196.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
195.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
194.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
194.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
192.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
188.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
188.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
188.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
188.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
187.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
187.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
185.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
182.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
181.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
181.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
179.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
178.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
178.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
178.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
177.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
175.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
175.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
174.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
174.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
174.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
173.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
173.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
171.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
170.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
168.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
168.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
168.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
167.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
166.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
165.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
164.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
162.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
161.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
161.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
160.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
160.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
158.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
157.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
156.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
154.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
154.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
153.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
151.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
150.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
150.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
149.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
149.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
148.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
146.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
144.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
142.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
142.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
140.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
139.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
139.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
138.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
138.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
137.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
132.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
131.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
131.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
128.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
122.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
119.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
118.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
118.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
117.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
116.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
111.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
111.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
110.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
110.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
109.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
108.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
104.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
103.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
99.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
98.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
97.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
96.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
74.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
53.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
178.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 179.0
Samples: 4
Max nTPM: 188.4
Min nTPM: 168.5
Sample A
Male
168.5
Sample B
Male
178.1
Sample C
Female
188.4
Sample D
Female
180.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.