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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDDC2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
150.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
128.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
104.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
101.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
96.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
87.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
87.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
76.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
72.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
66.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
63.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
62.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
61.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
61.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
59.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
58.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
57.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
54.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
51.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
48.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
46.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
46.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
45.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
43.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
43.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
41.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
41.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
40.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
39.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
38.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
37.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
36.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
36.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
36.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
34.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
33.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
33.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
32.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
32.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
32.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
31.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
31.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
31.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
31.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
30.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
26.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
26.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
26.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
25.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
24.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
24.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
23.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
21.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
21.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
18.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDDC2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
116.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
107.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
100.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
91.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
86.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
86.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
84.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
83.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
78.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
75.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
74.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
74.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
74.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
74.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
72.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
70.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
70.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
69.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
69.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
69.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
67.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
67.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
66.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
66.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
64.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
64.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
64.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
64.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
63.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
63.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
62.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
62.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
61.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
61.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
61.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
60.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
60.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
59.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
59.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
59.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
59.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
58.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
58.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
58.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
58.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
57.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
57.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
57.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
57.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
57.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
57.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
56.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
56.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
56.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
56.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
56.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
56.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
56.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
56.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
55.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
55.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
55.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
55.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
55.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
55.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
54.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
54.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
54.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
54.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
54.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
54.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
53.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
53.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
53.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
53.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
53.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
53.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
53.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
53.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
53.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
52.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
52.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
52.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
52.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
52.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
52.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
52.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
52.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
51.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
51.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
51.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
51.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
51.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
51.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
51.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
51.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
51.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
50.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
50.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
50.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
50.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
50.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
50.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
50.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
50.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
50.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
49.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
49.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
49.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
49.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
49.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
49.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
49.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
49.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
49.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
49.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
49.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
48.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
48.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
48.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
48.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
48.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
48.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
48.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
48.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
48.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
48.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
48.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
48.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
47.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
47.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
47.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
47.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
47.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
47.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
47.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
47.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
47.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
46.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
46.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
46.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
46.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
46.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
46.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
46.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
46.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
46.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
46.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
46.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
46.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
46.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
46.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
45.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
45.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
45.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
45.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
45.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
45.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
45.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
45.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
45.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
45.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
45.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
45.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
45.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
45.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
45.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
45.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
44.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
44.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
44.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
44.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
44.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
44.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
44.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
44.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
44.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
44.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
44.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
44.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
44.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
44.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
44.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
44.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
43.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
43.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
43.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
43.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
43.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
43.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
43.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
43.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
43.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
43.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
43.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
43.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
42.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
42.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
42.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
42.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
42.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
42.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
42.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
42.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
42.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
42.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
42.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
42.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
42.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
42.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
42.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
42.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
42.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
41.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
41.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
41.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
41.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
41.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
41.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
41.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
41.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
41.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
41.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
41.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
41.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
41.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
41.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
41.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
41.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
41.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
41.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
40.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
40.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
40.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
40.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
40.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
40.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
40.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
40.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
40.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
39.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
39.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
39.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
39.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
39.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
39.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
39.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
39.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
39.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
39.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
39.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
38.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
38.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
38.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
38.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
38.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
38.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
38.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
38.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
38.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
37.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
37.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
37.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
37.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
37.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
37.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
37.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
37.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
37.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
37.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
36.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
36.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
36.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
36.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
36.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
36.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
36.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
36.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
36.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
35.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
35.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
35.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
35.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
35.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
35.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
35.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
35.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
35.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
35.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
35.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
35.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
35.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
35.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
35.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
35.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
34.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
34.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
34.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
34.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
34.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
34.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
34.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
34.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
34.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
34.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
34.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
33.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
33.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
33.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
33.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
33.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
33.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
33.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
33.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
33.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
32.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
32.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
32.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
32.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
32.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
32.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
32.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
32.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
32.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
31.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
31.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
31.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
31.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
31.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
31.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
31.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
30.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
30.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
30.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
30.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
30.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
29.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
29.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
29.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
29.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
29.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
29.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
28.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
28.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
28.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
28.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
27.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
27.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
27.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
27.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
26.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
26.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
25.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
25.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
25.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
25.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
25.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
25.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
25.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
24.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
24.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
24.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
23.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
23.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
22.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
21.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
21.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
20.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
20.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
19.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
17.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
15.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
14.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDDC2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
116.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
66.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
63.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
61.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
58.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
55.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
51.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
50.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
50.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
50.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
50.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
50.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
50.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
49.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
49.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
49.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
48.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
48.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
47.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
46.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
46.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
45.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
45.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
44.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
44.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
44.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
43.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
43.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
43.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
41.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
41.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
41.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
40.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
40.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
40.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
40.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
40.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
39.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
39.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
39.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
38.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
37.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
37.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
37.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
36.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
36.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
36.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
35.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
35.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
35.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
35.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
33.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
32.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
32.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
31.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
31.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
30.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
26.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
26.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
26.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
25.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
25.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
25.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
24.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDDC2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
243.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
122.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
117.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
111.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
105.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
105.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
101.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
100.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
99.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
99.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
95.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
95.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
94.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
93.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
92.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
90.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
90.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
88.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
88.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
87.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
83.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
83.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
83.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
82.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
81.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
81.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
81.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
80.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
79.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
79.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
77.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
77.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
76.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
74.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
74.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
74.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
73.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
72.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
72.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
72.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
71.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
71.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
71.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
71.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
70.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
70.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
70.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
70.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
68.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
68.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
68.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
67.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
67.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
67.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
67.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
67.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
66.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
66.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
66.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
66.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
66.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
65.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
65.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
65.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
65.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
65.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
64.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
64.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
64.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
64.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
63.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
63.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
63.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
63.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
63.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
63.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
62.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
62.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
62.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
62.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
62.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
61.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
61.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
61.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
61.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
61.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
60.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
60.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
60.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
60.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
60.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
59.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
59.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
59.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
59.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
58.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
58.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
58.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
58.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
58.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
57.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
57.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
57.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
57.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
56.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
56.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
56.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
56.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
56.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
55.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
55.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
55.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
55.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
55.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
54.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
54.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
54.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
54.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
54.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
54.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
54.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
54.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
53.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
53.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
53.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
53.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
53.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
53.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
53.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
52.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
52.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
52.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
52.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
51.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
51.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
51.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
50.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
50.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
50.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
50.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
50.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
50.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
50.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
49.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
49.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
49.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
49.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
49.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
48.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
48.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
48.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
48.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
48.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
48.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
48.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
47.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
47.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
47.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
47.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
46.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
46.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
46.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
46.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
46.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
45.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
45.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
45.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
45.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
45.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
45.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
45.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
44.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
44.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
44.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
44.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
44.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
43.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
43.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
43.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
43.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
43.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
43.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
43.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
43.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
43.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
42.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
42.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
42.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
42.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
42.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
42.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
42.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
41.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
41.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
40.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
40.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
40.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
40.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
40.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
39.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
38.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
38.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
38.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
37.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
37.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
37.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
37.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
37.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
37.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
37.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
36.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
36.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
36.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
36.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
34.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
34.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
32.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
32.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
32.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
32.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
31.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
31.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
30.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
30.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
30.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
29.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
27.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
27.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
27.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
26.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
25.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
24.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
24.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
24.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
22.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
21.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000640003
Tumor
0.6
CPT0009080003
Normal
0.6
CPT0078930003
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0009020003
Normal
0.5
CPT0088970003
Tumor
0.5
CPT0012640003
Normal
0.5
CPT0088900003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0011240003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0024680001
Normal
0.5
CPT0012770003
Normal
0.4
CPT0089020003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0078940001
Normal
0.4
CPT0015810003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0089480003
Normal
0.3
CPT0025230003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0023710001
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0086370003
Normal
0.3
CPT0012570003
Normal
0.3
CPT0001230001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0025880003
Tumor
0.3
CPT0086890003
Normal
0.3
CPT0011410003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0015730003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0081620001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0006900003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0066430001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0007470001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0002350011
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0084590001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0086870003
Tumor
-0.3
CPT0017450001
Normal
-0.3
CPT0092160003
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0088690003
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0079410003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0079270003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0065820001
Normal
-0.4
CPT0006440003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0065810003
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0078830003
Tumor
-0.5
CPT0012180003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0092790003
Tumor
-0.6
CPT0088480003
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0088630003
Tumor
-0.7
CPT0012550003
Tumor
-0.7
CPT0084560003
Tumor
-0.8
CPT0023350003
Tumor
-0.8
CPT0001180009
Tumor
-0.9
CPT0092800003
Normal
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.