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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
192.2
nTPM
HPA Brain:
342.9
nTPM
GTEx:
192.2
nTPM
FANTOM5:
87.8
Scaled Tags Per Million
Pig:
488.1
nTPM
Mouse:
719.3
nTPM
Allen mouse:
24.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
342.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 295.5
2019
Male, age 18, unknown
388.8
1827
Male, age 72, unknown
362.2
2666
Male, age 74, left hemisphere
346.6
2411
Female, age 72, unknown
334.8
2219
Male, age 76, both hemispheres
329.3
2586
Male, age 75, left hemisphere
270.2
2828
Female, age 72, unknown
260.4
1870
Female, age 42, unknown
237.0
1833
Male, age 53, unknown
222.0
1830
Male, age 51, unknown
204.3
Dorsal raphe nucleus nTPM: 297.4
2298
Female, age 72, unknown
408.1
2047
Male, age 72, unknown
325.3
1828
Male, age 53, unknown
316.8
2750
Male, age 76, both hemispheres
267.2
2016
Female, age 72, unknown
169.8
Inferior colliculus nTPM: 286.2
2097
Female, age 72, unknown
352.0
1848
Female, age 42, unknown
286.4
1890
Male, age 53, unknown
279.6
2849
Male, age 72, unknown
226.9
Median raphe nucleus nTPM: 331.5
2220
Male, age 76, midline
331.5
Periaquaductal grey, anterior nTPM: 302.6
1795
Male, age 51, unknown
327.7
1947
Male, age 18, unknown
302.6
2502
Female, age 75, unknown
277.5
Periaquaductal grey, dorsal nTPM: 228.2
1831
Male, age 72, unknown
250.2
1840
Male, age 53, unknown
243.2
2464
Female, age 72, unknown
228.6
2850
Male, age 76, both hemispheres
190.9
Periaquaductal grey, lateral nTPM: 212.3
2272
Male, age 74, both hemispheres
243.0
2053
Male, age 18, unknown
206.0
2140
Male, age 76, both hemispheres
187.8
Pretectal area nTPM: 342.9
1944
Female, age 72, unknown
499.9
1816
Male, age 51, unknown
489.3
2007
Male, age 72, unknown
485.3
1817
Female, age 42, unknown
451.0
1815
Male, age 53, unknown
344.4
2667
Female, age 75, unknown
325.2
2224
Female, age 72, unknown
299.8
2407
Male, age 75, both hemispheres
228.6
2273
Male, age 74, both hemispheres
217.9
2316
Male, age 76, right hemisphere
216.2
2825
Male, age 18, unknown
214.7
Red nucleus nTPM: 237.4
2785
Male, age 18, unknown
340.4
1821
Female, age 72, unknown
282.5
2584
Male, age 75, left hemisphere
274.1
2725
Female, age 75, unknown
249.4
1954
Female, age 42, unknown
240.4
2588
Male, age 74, left hemisphere
235.7
2823
Male, age 76, right hemisphere
225.4
1865
Male, age 51, unknown
203.3
1904
Male, age 53, unknown
202.6
2227
Male, age 72, unknown
201.2
2503
Female, age 72, unknown
199.8
2769
Male, age 72, unknown
194.1
Substantia nigra nTPM: 322.5
1941
Male, age 53, unknown
447.9
1916
Female, age 42, unknown
440.3
1889
Female, age 72, unknown
419.1
1851
Male, age 51, unknown
357.0
2241
Male, age 72, unknown
332.8
2409
Female, age 72, unknown
282.9
2665
Male, age 74, both hemispheres
282.6
2590
Female, age 75, unknown
225.7
2583
Male, age 75, right hemisphere
223.5
2699
Male, age 18, unknown
213.3
Superior colliculus nTPM: 283.1
2087
Female, age 72, unknown
409.1
2668
Female, age 75, unknown
384.7
1796
Male, age 53, unknown
317.0
2261
Male, age 18, unknown
315.5
1895
Male, age 76, right hemisphere
306.2
1839
Male, age 51, unknown
247.0
2664
Male, age 75, both hemispheres
231.1
1913
Female, age 42, unknown
218.9
2587
Male, age 74, left hemisphere
210.9
1995
Male, age 72, unknown
190.4
Ventral tegmental area nTPM: 309.3
2218
Male, age 76, both hemispheres
391.5
2410
Female, age 72, unknown
372.8
1915
Female, age 42, unknown
339.8
1942
Male, age 51, unknown
290.7
2223
Female, age 72, unknown
241.8
2021
Male, age 53, unknown
219.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
192.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 192.2
Samples: 139
Max nTPM: 918.8
Min nTPM: 55.5
Std nTPM: 135.5
Median nTPM: 142.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
918.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
714.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
550.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
523.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
477.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
472.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
448.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
433.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
432.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
430.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
414.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
407.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
400.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
382.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
358.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
357.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
349.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
349.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
337.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
326.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
308.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
299.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
298.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
297.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
295.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
292.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
287.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
273.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
270.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
268.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
259.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
256.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
256.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
253.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
247.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
244.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
241.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
239.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
228.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
225.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
221.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
220.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
219.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
216.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
215.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
214.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
213.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
208.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
203.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
203.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
199.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
199.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
196.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
190.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
189.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
184.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
179.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
176.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
174.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
170.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
170.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
168.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
167.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
160.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
156.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
152.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
148.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
148.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
148.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
142.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
140.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
138.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
136.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
134.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
133.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
132.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
132.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
131.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
127.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
126.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
125.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
120.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
118.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
118.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
118.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
117.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
116.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
114.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
111.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
110.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
110.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
107.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
106.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
104.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
104.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
104.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
103.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
102.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
101.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
100.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
100.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
99.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
99.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
98.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
96.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
95.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
93.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
93.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
93.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
92.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
91.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
91.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
88.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
88.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
87.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
87.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
86.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
85.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
85.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
83.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
82.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
81.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
79.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
79.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
76.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
76.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
75.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
72.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
70.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
70.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
68.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
67.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
67.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
66.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
64.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
63.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
62.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
61.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
55.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
719.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 719.3
Samples: 4
Max nTPM: 725.1
Min nTPM: 710.1
Sample A
Male
725.1
Sample B
Male
710.1
Sample C
Female
717.2
Sample D
Female
724.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.