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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPI1 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.96
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.044
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
72%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
59%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
643.6
Number of samples
283
Samples
Sample
Description
TPM
TCGA-C5-A0TN-01A
21 years, female, black or african american, stage:Stage IB, dead, 348 days
3560.8
TCGA-EK-A2RA-01A
74 years, female, stage:Stage IIA, alive, 1246 days
2391.1
TCGA-LP-A4AW-01A
52 years, female, asian, stage:Stage IA, alive, 27 days
2053.6
TCGA-LP-A7HU-01A
53 years, female, asian, stage:Stage II, alive, 406 days
1809.2
TCGA-C5-A7CK-01A
58 years, female, white, stage:Stage IVA, dead, 4086 days
1606.1
TCGA-EK-A2R8-01A
48 years, female, white, stage:Stage IB, alive, 44 days
1523.0
TCGA-VS-A8EB-01A
41 years, female, white, stage:Stage IIIB, dead, 305 days
1495.3
TCGA-EA-A5ZF-01A
56 years, female, asian, stage:Stage IB, alive, 828 days
1494.8
TCGA-JW-A5VK-01A
43 years, female, black or african american, stage:Stage IB, alive, 623 days
1460.7
TCGA-FU-A3WB-01A
43 years, female, white, stage:Stage IIA, alive, 491 days
1452.1
TCGA-ZJ-AAXU-01A
51 years, female, white, stage:Stage IIB, alive, 5 days
1214.1
TCGA-VS-A9UV-01A
74 years, female, stage:Stage IVA, dead, 104 days
1203.6
TCGA-MU-A8JM-01A
46 years, female, white, stage:Stage IB, alive, 607 days
1182.7
TCGA-VS-A9UJ-01A
55 years, female, stage:Stage IIB, dead, 52 days
1173.6
TCGA-C5-A2M2-01A
56 years, female, white, stage:Stage IB, dead, 1011 days
1166.2
TCGA-VS-A8EC-01A
55 years, female, white, stage:Stage IIIB, alive, 1415 days
1146.1
TCGA-Q1-A73Q-01A
46 years, female, white, stage:Stage I, alive, 284 days
1131.6
TCGA-EX-A3L1-01A
32 years, female, white, stage:Stage IIA, alive, 463 days
1116.4
TCGA-C5-A3HL-01A
76 years, female, white, stage:Stage IB, alive, 621 days
1104.6
TCGA-EK-A2RO-01A
59 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
1104.2
TCGA-VS-A8EG-01A
36 years, female, stage:Stage IB, alive, 1386 days
1099.5
TCGA-C5-A8ZZ-01A
41 years, female, white, stage:Stage IIB, alive, 636 days
1054.3
TCGA-DS-A3LQ-01A
46 years, female, stage:Stage IIIB, alive, 699 days
1047.2
TCGA-VS-A9UH-01A
53 years, female, black or african american, stage:Stage IVA, alive, 1427 days
1047.0
TCGA-EX-A449-01A
42 years, female, white, stage:Stage IVB, alive, 447 days
1038.6
TCGA-EX-A1H5-01A
58 years, female, black or african american, stage:Stage IIB, alive, 619 days
1036.4
TCGA-DG-A2KK-01A
51 years, female, stage:Stage IIIB, alive, 2496 days
1024.5
TCGA-C5-A8YQ-01A
79 years, female, white, stage:Stage IB, dead, 715 days
1017.2
TCGA-EA-A78R-01A
54 years, female, asian, stage:Stage IB, alive, 410 days
1011.2
TCGA-C5-A1MF-01A
49 years, female, white, stage:Stage IB, alive, 1617 days
995.6
TCGA-VS-A950-01A
42 years, female, stage:Stage IIIA, alive, 1221 days
987.8
TCGA-MY-A5BF-01A
68 years, female, white, stage:Stage IIA, alive, 634 days
986.6
TCGA-VS-A953-01A
63 years, female, stage:Stage IVA, dead, 477 days
977.0
TCGA-C5-A1M9-01A
46 years, female, white, stage:Stage IB, dead, 1065 days
966.6
TCGA-DG-A2KH-01A
25 years, female, stage:Stage IB, alive, 34 days
965.3
TCGA-EA-A5ZE-01A
54 years, female, asian, stage:Stage IB, alive, 829 days
956.6
TCGA-2W-A8YY-01A
51 years, female, white, stage:Stage IB, alive, 533 days
951.9
TCGA-C5-A7UC-01A
48 years, female, white, stage:Stage IB, dead, 523 days
946.6
TCGA-DS-A0VN-01A
47 years, female, white, stage:Stage IB, alive, 3609 days
945.1
TCGA-C5-A1M6-01A
55 years, female, white, stage:Stage IIB, dead, 955 days
942.2
TCGA-C5-A8XK-01A
30 years, female, black or african american, stage:'--, alive, 3039 days
938.4
TCGA-VS-A9UD-01A
73 years, female, white, stage:Stage IIIA, alive, 739 days
916.4
TCGA-EK-A2RL-01A
32 years, female, black or african american, stage:Stage IB, dead, 1453 days
913.7
TCGA-FU-A3HZ-01A
64 years, female, white, stage:Stage IIA, alive, 1103 days
904.7
TCGA-FU-A3HY-01A
47 years, female, white, stage:Stage IB, alive, 954 days
904.1
TCGA-EA-A439-01A
50 years, female, asian, stage:Stage IIA, alive, 965 days
901.5
TCGA-GH-A9DA-01A
27 years, female, white, stage:Stage IB, alive, 540 days
901.3
TCGA-MA-AA3Z-01A
43 years, female, white, stage:Stage IB, alive, 595 days
900.2
TCGA-Q1-A73O-01A
37 years, female, stage:Stage IB, alive, 428 days
896.3
TCGA-DR-A0ZL-01A
53 years, female, asian, stage:Stage IB, alive, 2669 days
880.8
TCGA-DG-A2KL-01A
53 years, female, stage:Stage IIA, alive, 1367 days
875.2
TCGA-VS-A8QA-01A
44 years, female, stage:Stage IB, alive, 1099 days
874.5
TCGA-EA-A44S-01A
31 years, female, white, stage:Stage IIIB, alive, 369 days
872.1
TCGA-JX-A3Q8-01A
40 years, female, asian, stage:Stage IB, alive, 1357 days
871.5
TCGA-Q1-A6DW-01A
44 years, female, white, stage:Stage I, alive, 534 days
871.1
TCGA-VS-A94Y-01A
47 years, female, white, stage:Stage IIB, dead, 144 days
867.4
TCGA-EK-A2H0-01A
24 years, female, white, stage:Stage IIB, alive, 1847 days
861.6
TCGA-C5-A7UI-01A
42 years, female, black or african american, stage:Stage IB, dead, 2888 days
848.7
TCGA-Q1-A73S-01A
33 years, female, white, stage:Stage IB, alive, 688 days
832.3
TCGA-LP-A5U3-01A
40 years, female, asian, stage:Stage IB, alive, 25 days
826.7
TCGA-JW-A5VH-01A
53 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
826.4
TCGA-FU-A3TQ-01A
55 years, female, white, stage:Stage IIIB, alive, 795 days
817.3
TCGA-HM-A4S6-01A
51 years, female, white, stage:Stage IIIB, alive, 454 days
816.4
TCGA-EK-A3GJ-01A
51 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
809.2
TCGA-UC-A7PG-01A
44 years, female, white, stage:Stage IIIB, dead, 370 days
808.8
TCGA-VS-A952-01A
66 years, female, white, stage:Stage IB, alive, 1778 days
807.1
TCGA-VS-AA62-01A
51 years, female, white, stage:Stage IIB, dead, 469 days
805.3
TCGA-PN-A8MA-01A
43 years, female, black or african american, stage:Stage IIB, alive, 90 days
800.2
TCGA-DG-A2KJ-01A
50 years, female, stage:Stage IIIB, alive, 2893 days
799.9
TCGA-EA-A5FO-01A
59 years, female, white, stage:Stage IB, alive, 815 days
798.4
TCGA-VS-A9UY-01A
29 years, female, stage:Stage IVB, dead, 555 days
789.9
TCGA-EK-A2RB-01A
48 years, female, white, stage:Stage IVB, alive, 9 days
789.5
TCGA-BI-A20A-01A
49 years, female, white, stage:Stage IB, alive, 720 days
785.6
TCGA-C5-A905-01A
37 years, female, black or african american, stage:Stage IB, alive, 4879 days
784.2
TCGA-JW-A5VL-01A
37 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
783.3
TCGA-EK-A2H1-01A
20 years, female, white, stage:Stage IB, alive, 799 days
782.8
TCGA-EA-A410-01A
51 years, female, white, stage:Stage IIA, alive, 803 days
775.3
TCGA-VS-A8EL-01A
38 years, female, black or african american, stage:Stage IIB, alive, 1992 days
770.3
TCGA-JX-A5QV-01A
37 years, female, white, stage:Stage IB, alive, 636 days
766.8
TCGA-VS-A9V0-01A
58 years, female, stage:Stage IB, alive, 573 days
758.9
TCGA-C5-A1MK-01A
79 years, female, white, stage:Stage IIIB, dead, 74 days
758.9
TCGA-VS-A9U6-01A
52 years, female, white, stage:Stage IVB, alive, 1320 days
757.2
TCGA-Q1-A6DV-01A
36 years, female, asian, stage:Stage IB, alive, 491 days
753.5
TCGA-JW-A69B-01A
44 years, female, white, stage:Stage IB, alive, 863 days
753.1
TCGA-MA-AA42-01A
75 years, female, white, stage:Stage IIB, alive, 259 days
752.8
TCGA-VS-A9UZ-01A
61 years, female, white, stage:Stage IB, alive, 2044 days
750.5
TCGA-LP-A5U2-01A
30 years, female, asian, stage:Stage IIIB, alive, 9 days
748.9
TCGA-C5-A7CG-01A
55 years, female, white, stage:Stage IB, alive, 6408 days
739.0
TCGA-FU-A3EO-01A
55 years, female, white, stage:Stage IIB, alive, 490 days
735.1
TCGA-Q1-A5R3-01A
56 years, female, white, stage:'--, alive, 485 days
729.5
TCGA-EA-A50E-01A
45 years, female, asian, stage:Stage IVA, dead, 227 days
728.2
TCGA-VS-A9UO-01A
43 years, female, white, stage:Stage IIB, alive, 1456 days
727.8
TCGA-EX-A69L-01A
41 years, female, asian, stage:Stage IB, alive, 602 days
722.8
TCGA-EK-A2RE-01A
26 years, female, white, stage:Stage IIA, alive, 57 days
720.1
TCGA-C5-A8XJ-01A
74 years, female, white, stage:Stage IB, alive, 4467 days
718.7
TCGA-FU-A5XV-01A
32 years, female, white, stage:Stage IIIB, alive, 321 days
718.7
TCGA-IR-A3LI-01A
48 years, female, white, stage:Stage IVB, alive, 2493 days
717.3
TCGA-BI-A0VR-01A
53 years, female, white, stage:Stage IIIB, alive, 1505 days
713.8
TCGA-VS-A8Q9-01A
79 years, female, white, stage:Stage IB, alive, 1630 days
712.6
TCGA-Q1-A5R2-01A
64 years, female, white, stage:'--, alive, 499 days
712.4
TCGA-EK-A2IR-01A
48 years, female, white, stage:Stage IB, alive, 3442 days
709.9
TCGA-EK-A3GK-01A
33 years, female, white, stage:Stage IB, alive, 15 days
704.4
TCGA-VS-A9V3-01A
62 years, female, white, stage:Stage IVB, alive, 540 days
697.9
TCGA-VS-A8QH-01A
76 years, female, white, stage:Stage IB, dead, 1210 days
696.3
TCGA-FU-A770-01A
33 years, female, white, stage:Stage IIIB, alive, 34 days
690.4
TCGA-C5-A1ME-01A
40 years, female, white, stage:Stage IB, alive, 1756 days
687.3
TCGA-EA-A5ZD-01A
40 years, female, asian, stage:Stage IB, alive, 830 days
686.3
TCGA-MY-A913-01A
28 years, female, black or african american, stage:Stage IIA, alive, 524 days
685.7
TCGA-C5-A1M7-01A
37 years, female, white, stage:Stage IB, alive, 1409 days
684.4
TCGA-ZJ-A8QQ-01A
24 years, female, white, stage:Stage IIB, alive, 2056 days
683.1
TCGA-VS-A9UM-01A
39 years, female, black or african american, stage:Stage IVB, dead, 829 days
682.3
TCGA-VS-A958-01A
46 years, female, white, stage:Stage IIB, alive, 1525 days
681.2
TCGA-4J-AA1J-01A
31 years, female, white, stage:Stage IB, alive, 542 days
677.7
TCGA-Q1-A73P-01A
45 years, female, white, stage:Stage IB, alive, 483 days
677.5
TCGA-EA-A6QX-01A
49 years, female, asian, stage:Stage IIIB, alive, 730 days
677.4
TCGA-JX-A3Q0-01A
63 years, female, black or african american, stage:Stage III, alive, 6375 days
675.9
TCGA-MA-AA41-01A
33 years, female, white, stage:Stage IIB, alive, 279 days
675.3
TCGA-C5-A7UE-01A
45 years, female, white, stage:Stage IB, alive, 4738 days
674.4
TCGA-EK-A2RC-01A
33 years, female, stage:Stage IB, alive, 129 days
670.9
TCGA-MY-A5BE-01A
42 years, female, black or african american, stage:Stage IB, alive, 1066 days
667.2
TCGA-MY-A5BD-01A
62 years, female, white, stage:Stage IIB, alive, 1667 days
661.3
TCGA-C5-A1MH-01A
71 years, female, white, stage:Stage IIIB, dead, 1186 days
661.1
TCGA-EK-A2RM-01A
40 years, female, white, stage:Stage IB, alive, 50 days
660.9
TCGA-C5-A8XI-01A
69 years, female, black or african american, stage:Stage IB, alive, 254 days
654.9
TCGA-ZJ-A8QR-01A
38 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
653.9
TCGA-HM-A6W2-01A
34 years, female, black or african american, stage:Stage IVB, alive, 287 days
652.5
TCGA-EA-A5O9-01A
39 years, female, white, stage:Stage IB, alive, 788 days
651.2
TCGA-EA-A3HR-01A
57 years, female, white, stage:Stage II, alive, 940 days
647.6
TCGA-DS-A1OD-01A
49 years, female, white, stage:Stage IB, alive, 3874 days
645.8
TCGA-DS-A0VM-01A
51 years, female, white, stage:Stage IB, alive, 3589 days
644.1
TCGA-BI-A0VS-01A
48 years, female, white, stage:Stage IB, alive, 1735 days
639.8
TCGA-C5-A8YR-01A
56 years, female, white, stage:Stage IB, dead, 837 days
633.5
TCGA-VS-A957-01A
64 years, female, white, stage:Stage IB, alive, 1688 days
628.2
TCGA-C5-A7UH-01A
55 years, female, white, stage:Stage IIIB, alive, 3988 days
624.2
TCGA-FU-A23L-01A
60 years, female, white, stage:Stage IIA, alive, 725 days
624.0
TCGA-VS-A8EK-01A
65 years, female, white, stage:Stage IVA, dead, 829 days
615.1
TCGA-VS-A9V4-01A
63 years, female, white, stage:Stage IVA, dead, 132 days
614.0
TCGA-C5-A907-01A
47 years, female, white, stage:Stage IB, alive, 448 days
611.0
TCGA-C5-A1M8-01A
43 years, female, white, stage:Stage IB, alive, 919 days
610.8
TCGA-C5-A8YT-01A
36 years, female, white, stage:Stage IB, dead, 633 days
608.7
TCGA-LP-A4AU-01A
35 years, female, asian, stage:Stage IIIB, alive, 343 days
606.0
TCGA-EA-A97N-01A
38 years, female, white, stage:Stage IB, alive, 11 days
601.8
TCGA-C5-A902-01A
35 years, female, black or african american, stage:Stage IB, alive, 149 days
597.2
TCGA-Q1-A73R-01A
45 years, female, white, stage:Stage I, alive, 567 days
595.9
TCGA-C5-A1MI-01A
50 years, female, white, stage:Stage IB, dead, 1083 days
593.1
TCGA-VS-A9V1-01A
46 years, female, white, stage:Stage IVB, dead, 157 days
590.8
TCGA-EA-A556-01A
38 years, female, white, stage:Stage IB, alive, 453 days
588.0
TCGA-VS-A8QC-01A
51 years, female, white, stage:Stage IVA, dead, 350 days
583.8
TCGA-DS-A1OB-01A
45 years, female, white, stage:Stage IB, dead, 861 days
583.5
TCGA-C5-A1BM-01A
78 years, female, black or african american, stage:Stage IB, dead, 2520 days
578.7
TCGA-C5-A7CH-01A
43 years, female, white, stage:Stage IIB, alive, 4694 days
575.9
TCGA-DS-A7WF-01A
41 years, female, stage:Stage IB, dead, 492 days
575.6
TCGA-MU-A51Y-01A
27 years, female, white, stage:Stage IIA, alive, 854 days
571.1
TCGA-VS-A9UI-01A
76 years, female, white, stage:Stage IIB, dead, 1372 days
570.6
TCGA-FU-A3TX-01A
78 years, female, stage:Stage IB, alive, 45 days
568.6
TCGA-VS-A9U5-01A
57 years, female, white, stage:Stage IIB, alive, 1535 days
559.0
TCGA-IR-A3LK-01A
69 years, female, white, stage:Stage IB, dead, 908 days
557.4
TCGA-EA-A3QE-01A
45 years, female, white, stage:Stage IB, alive, 761 days
556.6
TCGA-HG-A2PA-01A
38 years, female, white, stage:Stage IB, dead, 773 days
556.0
TCGA-C5-A2LS-01A
37 years, female, white, stage:Stage IB, alive, 1345 days
555.6
TCGA-WL-A834-01A
57 years, female, white, stage:'--, alive, 791 days
553.7
TCGA-C5-A7X3-01A
70 years, female, white, stage:Stage IIIB, dead, 284 days
552.5
TCGA-C5-A2LT-01A
38 years, female, white, stage:Stage IB, alive, 2226 days
550.2
TCGA-DS-A5RQ-01A
80 years, female, white, stage:Stage IB, alive, 512 days
549.4
TCGA-ZJ-AAX4-01A
85 years, female, white, stage:Stage II, alive, 21 days
547.7
TCGA-C5-A7XC-01A
26 years, female, white, stage:Stage IB, alive, 1551 days
546.0
TCGA-ZX-AA5X-01A
64 years, female, white, stage:Stage IIIB, alive, 119 days
540.5
TCGA-EK-A2PM-01A
81 years, female, white, stage:Stage IIB, alive, 18 days
534.8
TCGA-FU-A57G-01A
49 years, female, white, stage:Stage IB, alive, 1078 days
532.8
TCGA-VS-A9UR-01A
53 years, female, white, stage:Stage IIA, alive, 793 days
523.5
TCGA-EA-A1QT-01A
47 years, female, white, stage:Stage IB, alive, 1243 days
519.9
TCGA-C5-A8XH-01A
39 years, female, white, stage:Stage IB, dead, 1394 days
517.2
TCGA-VS-A9UL-01A
79 years, female, white, stage:Stage IIIB, dead, 442 days
514.1
TCGA-VS-A9UQ-01A
32 years, female, stage:Stage IB, alive, 1263 days
511.5
TCGA-MA-AA3Y-01A
48 years, female, white, stage:Stage IB, alive, 542 days
509.1
TCGA-MU-A5YI-01A
60 years, female, black or african american, stage:Stage IA, alive, 1053 days
508.5
TCGA-EA-A3HQ-01A
60 years, female, white, stage:Stage II, alive, 1136 days
502.2
TCGA-MA-AA43-01A
48 years, female, white, stage:Stage IIIB, alive, 346 days
498.8
TCGA-EA-A4BA-01A
49 years, female, white, stage:Stage IB, alive, 755 days
498.1
TCGA-XS-A8TJ-01A
41 years, female, black or african american, stage:Stage IB, alive, 890 days
494.8
TCGA-EK-A2RJ-01A
51 years, female, white, stage:Stage IB, alive, 53 days
492.8
TCGA-JW-A5VG-01A
35 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
489.7
TCGA-RA-A741-01A
34 years, female, white, stage:Stage IIB, alive, 444 days
484.3
TCGA-HM-A3JJ-01A
40 years, female, black or african american, stage:Stage IB, dead, 659 days
483.8
TCGA-VS-A94X-01A
40 years, female, black or african american, stage:Stage IIB, dead, 506 days
481.7
TCGA-VS-A8QM-01A
47 years, female, stage:Stage IVB, dead, 951 days
480.3
TCGA-R2-A69V-01A
42 years, female, white, stage:Stage IB, alive, 596 days
476.2
TCGA-EA-A3QD-01A
59 years, female, white, stage:Stage IIIB, alive, 397 days
467.7
TCGA-C5-A7CO-01A
68 years, female, white, stage:Stage IB, alive, 4482 days
467.2
TCGA-EK-A2GZ-01A
64 years, female, black or african american, stage:Stage IIIB, alive, 383 days
466.7
TCGA-JW-A852-01A
42 years, female, white, stage:Stage IIB, dead, 252 days
460.6
TCGA-EK-A2PI-01A
44 years, female, white, stage:Stage IIIB, alive, 586 days
459.1
TCGA-C5-A2LV-01A
36 years, female, black or african american, stage:Stage IB, alive, 2234 days
458.8
TCGA-IR-A3LA-01A
60 years, female, white, stage:Stage IB, alive, 4172 days
455.3
TCGA-MA-AA3X-01A
50 years, female, black or african american, stage:Stage IIIB, alive, 617 days
453.0
TCGA-JW-A5VJ-01A
56 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
445.9
TCGA-VS-A94W-01A
39 years, female, white, stage:Stage IIB, alive, 1243 days
444.2
TCGA-DS-A1OA-01A
77 years, female, asian, stage:Stage IB, dead, 879 days
444.2
TCGA-UC-A7PD-01A
21 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
443.0
TCGA-FU-A3NI-01A
45 years, female, white, stage:Stage IB, dead, 638 days
442.9
TCGA-VS-A9UB-01A
54 years, female, stage:Stage IIB, alive, 911 days
442.7
TCGA-VS-A9U7-01A
30 years, female, white, stage:Stage IB, alive, 1472 days
438.1
TCGA-EK-A2RK-01A
67 years, female, white, stage:Stage IA, alive, 13 days
436.2
TCGA-EX-A8YF-01A
44 years, female, white, stage:Stage IB, alive, 473 days
432.6
TCGA-FU-A3YQ-01A
35 years, female, white, stage:Stage IB, alive, 861 days
432.0
TCGA-ZJ-AAXA-01A
64 years, female, white, stage:Stage IB, alive, 43 days
431.7
TCGA-C5-A1BL-01A
32 years, female, white, stage:Stage IB, alive, 5271 days
427.4
TCGA-IR-A3LF-01A
64 years, female, white, stage:Stage IB, alive, 2949 days
426.4
TCGA-C5-A7X8-01A
35 years, female, white, stage:Stage IB, alive, 83 days
425.2
TCGA-C5-A1MN-01A
42 years, female, white, stage:Stage IIIB, dead, 1245 days
423.4
TCGA-EK-A2PG-01A
88 years, female, black or african american, stage:'--, alive, 46 days
423.2
TCGA-C5-A3HE-01A
44 years, female, white, stage:Stage IB, alive, 548 days
413.6
TCGA-C5-A2LZ-01A
65 years, female, white, stage:Stage IIIB, dead, 3046 days
413.3
TCGA-VS-A8QF-01A
42 years, female, white, stage:Stage IIB, alive, 1800 days
411.7
TCGA-C5-A1MQ-01A
35 years, female, white, stage:Stage IIA, alive, 1031 days
409.9
TCGA-C5-A1BJ-01A
34 years, female, white, stage:Stage IIB, alive, 4385 days
408.9
TCGA-C5-A7X5-01A
72 years, female, black or african american, stage:Stage IVB, dead, 414 days
406.3
TCGA-EK-A2R9-01A
58 years, female, white, stage:Stage IB, alive, 4 days
405.6
TCGA-VS-A94Z-01A
38 years, female, white, stage:Stage IIB, alive, 1015 days
398.6
TCGA-C5-A7CM-01A
35 years, female, white, stage:Stage IB, alive, 619 days
393.6
TCGA-VS-A9UU-01A
42 years, female, stage:Stage IIB, alive, 442 days
388.9
TCGA-EA-A3Y4-01A
40 years, female, white, stage:Stage IB, alive, 1122 days
382.3
TCGA-IR-A3LL-01A
60 years, female, white, stage:Stage IB, alive, 1106 days
380.6
TCGA-DS-A1O9-01A
75 years, female, white, stage:Stage IVA, dead, 266 days
379.3
TCGA-UC-A7PI-01A
44 years, female, white, stage:Stage IB, alive, 2114 days
371.3
TCGA-C5-A2M1-01A
37 years, female, white, stage:Stage IB, alive, 1169 days
364.7
TCGA-EA-A3HT-01A
68 years, female, white, stage:Stage IB, alive, 954 days
362.3
TCGA-IR-A3LB-01A
53 years, female, white, stage:Stage IB, dead, 2032 days
360.5
TCGA-FU-A23K-01A
28 years, female, white, stage:Stage IIIB, alive, 372 days
353.0
TCGA-MA-AA3W-01A
54 years, female, white, stage:Stage IB, alive, 685 days
350.2
TCGA-C5-A7CJ-01A
42 years, female, white, stage:Stage IIA, dead, 3097 days
347.8
TCGA-DS-A0VL-01A
25 years, female, white, stage:Stage IB, dead, 1692 days
347.5
TCGA-C5-A1MJ-01A
61 years, female, white, stage:Stage IB, dead, 14 days
346.1
TCGA-UC-A7PF-01A
44 years, female, stage:Stage IB, dead, 2859 days
345.7
TCGA-VS-A8EJ-01A
60 years, female, white, stage:Stage IIB, dead, 607 days
343.8
TCGA-EA-A411-01A
50 years, female, white, stage:Stage IB, alive, 747 days
340.6
TCGA-EK-A3GN-01A
47 years, female, white, stage:Stage IIIB, alive, 27 days
339.4
TCGA-DG-A2KM-01A
46 years, female, stage:Stage IB, alive, 1946 days
339.2
TCGA-IR-A3L7-01A
37 years, female, white, stage:Stage IB, alive, 4483 days
337.5
TCGA-VS-A9V2-01A
29 years, female, white, stage:Stage IB, alive, 555 days
336.4
TCGA-C5-A7CL-01A
48 years, female, white, stage:Stage IIIB, dead, 471 days
332.9
TCGA-JX-A3PZ-01A
25 years, female, white, stage:Stage IB, dead, 642 days
327.0
TCGA-JW-A5VI-01A
45 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
322.3
TCGA-VS-A9UC-01A
32 years, female, stage:Stage IIB, alive, 825 days
321.8
TCGA-VS-A8EH-01A
56 years, female, stage:Stage IIIB, alive, 986 days
319.0
TCGA-C5-A3HF-01A
24 years, female, white, stage:Stage IB, dead, 543 days
316.4
TCGA-EA-A3HU-01A
43 years, female, white, stage:Stage II, alive, 1013 days
313.0
TCGA-C5-A901-01A
44 years, female, white, stage:'--, alive, 518 days
312.8
TCGA-VS-A954-01A
67 years, female, stage:Stage IIIB, alive, 1714 days
312.2
TCGA-C5-A2LX-01A
54 years, female, white, stage:Stage IB, alive, 2526 days
308.5
TCGA-DS-A7WI-01A
43 years, female, white, stage:Stage IIA, dead, 252 days
308.2
TCGA-JW-AAVH-01A
46 years, female, white, stage:Stage IB, alive, 552 days
306.9
TCGA-LP-A4AX-01A
45 years, female, asian, stage:Stage IB, alive, 380 days
302.6
TCGA-VS-A8EI-01A
38 years, female, white, stage:Stage IIB, alive, 729 days
302.5
TCGA-VS-A959-01A
76 years, female, stage:Stage IIB, alive, 1561 days
290.8
TCGA-EA-A3HS-01A
35 years, female, white, stage:Stage IB, alive, 959 days
287.8
TCGA-C5-A1ML-01A
49 years, female, white, stage:Stage IB, dead, 636 days
282.6
TCGA-IR-A3LC-01A
40 years, female, white, stage:Stage IB, alive, 3935 days
275.1
TCGA-VS-A9UP-01A
43 years, female, stage:Stage IIA, alive, 1444 days
266.9
TCGA-FU-A40J-01A
38 years, female, white, stage:Stage IIIB, alive, 426 days
266.9
TCGA-C5-A1M5-01A
53 years, female, white, stage:Stage IB, dead, 2052 days
264.6
TCGA-EA-A1QS-01A
46 years, female, white, stage:Stage IB, alive, 1203 days
263.6
TCGA-EK-A2R7-01A
45 years, female, white, stage:Stage IB, alive, 27 days
251.6
TCGA-Q1-A5R1-01A
32 years, female, white, stage:Stage IB, alive, 474 days
248.2
TCGA-EK-A2PL-01A
36 years, female, white, stage:Stage IIIB, alive, 13 days
240.9
TCGA-FU-A2QG-01A
29 years, female, white, stage:Stage IB, alive, 579 days
236.5
TCGA-EK-A2PK-01A
43 years, female, white, stage:Stage IB, alive, 12 days
234.5
TCGA-DS-A0VK-01A
45 years, female, white, stage:Stage IB, dead, 1118 days
229.3
TCGA-HM-A3JK-01A
64 years, female, white, stage:Stage IIA, alive, 632 days
210.0
TCGA-EX-A69M-01A
62 years, female, white, stage:Stage IB, dead, 253 days
195.5
TCGA-C5-A2LY-01A
30 years, female, white, stage:Stage IB, alive, 2383 days
189.7
TCGA-EA-A43B-01A
43 years, female, white, stage:Stage IB, alive, 791 days
188.3
TCGA-EK-A2IP-01A
28 years, female, white, stage:Stage IB, alive, 202 days
178.0
TCGA-DS-A1OC-01A
47 years, female, white, stage:Stage IB, alive, 376 days
162.8
TCGA-DS-A7WH-01A
34 years, female, white, stage:Stage IB, alive, 533 days
159.0
TCGA-VS-A8Q8-01A
26 years, female, white, stage:Stage IB, dead, 978 days
155.6
TCGA-C5-A1MP-01A
34 years, female, black or african american, stage:Stage IB, alive, 109 days
127.5
TCGA-Q1-A6DT-01A
55 years, female, white, stage:Stage I, dead, 275 days
123.1
TCGA-DR-A0ZM-01A
61 years, female, white, stage:Stage IIIB, alive, 1791 days
116.1
TCGA-VS-A9UT-01A
72 years, female, asian, stage:Stage IB, alive, 482 days
116.1
TCGA-IR-A3LH-01A
49 years, female, black or african american, stage:Stage IIA, alive, 2394 days
114.4
TCGA-VS-A9V5-01A
50 years, female, white, stage:Stage IIB, dead, 494 days
100.2
TCGA-EK-A2RN-01A
45 years, female, white, stage:Stage IB, alive, 71 days
77.6
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.