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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS13 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.96
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.025
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
65%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
64%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
815.5
Number of samples
283
Samples
Sample
Description
TPM
TCGA-LP-A5U2-01A
30 years, female, asian, stage:Stage IIIB, alive, 9 days
2906.6
TCGA-C5-A2LT-01A
38 years, female, white, stage:Stage IB, alive, 2226 days
2461.7
TCGA-VS-A8EC-01A
55 years, female, white, stage:Stage IIIB, alive, 1415 days
2359.0
TCGA-HM-A6W2-01A
34 years, female, black or african american, stage:Stage IVB, alive, 287 days
2231.4
TCGA-VS-A953-01A
63 years, female, stage:Stage IVA, dead, 477 days
2215.5
TCGA-DG-A2KH-01A
25 years, female, stage:Stage IB, alive, 34 days
2190.8
TCGA-EK-A2H0-01A
24 years, female, white, stage:Stage IIB, alive, 1847 days
2042.6
TCGA-C5-A2M1-01A
37 years, female, white, stage:Stage IB, alive, 1169 days
2037.7
TCGA-Q1-A73S-01A
33 years, female, white, stage:Stage IB, alive, 688 days
2005.7
TCGA-FU-A57G-01A
49 years, female, white, stage:Stage IB, alive, 1078 days
1989.8
TCGA-EK-A2R8-01A
48 years, female, white, stage:Stage IB, alive, 44 days
1963.5
TCGA-VS-A9V4-01A
63 years, female, white, stage:Stage IVA, dead, 132 days
1914.8
TCGA-FU-A3EO-01A
55 years, female, white, stage:Stage IIB, alive, 490 days
1875.2
TCGA-EA-A5FO-01A
59 years, female, white, stage:Stage IB, alive, 815 days
1842.9
TCGA-C5-A1MF-01A
49 years, female, white, stage:Stage IB, alive, 1617 days
1836.1
TCGA-2W-A8YY-01A
51 years, female, white, stage:Stage IB, alive, 533 days
1798.7
TCGA-C5-A1M9-01A
46 years, female, white, stage:Stage IB, dead, 1065 days
1779.9
TCGA-EA-A3QD-01A
59 years, female, white, stage:Stage IIIB, alive, 397 days
1751.5
TCGA-EK-A2R9-01A
58 years, female, white, stage:Stage IB, alive, 4 days
1684.1
TCGA-C5-A8YQ-01A
79 years, female, white, stage:Stage IB, dead, 715 days
1681.2
TCGA-RA-A741-01A
34 years, female, white, stage:Stage IIB, alive, 444 days
1670.1
TCGA-MY-A913-01A
28 years, female, black or african american, stage:Stage IIA, alive, 524 days
1662.7
TCGA-MU-A5YI-01A
60 years, female, black or african american, stage:Stage IA, alive, 1053 days
1643.5
TCGA-EK-A2PM-01A
81 years, female, white, stage:Stage IIB, alive, 18 days
1625.2
TCGA-C5-A7UC-01A
48 years, female, white, stage:Stage IB, dead, 523 days
1565.9
TCGA-C5-A8ZZ-01A
41 years, female, white, stage:Stage IIB, alive, 636 days
1560.6
TCGA-Q1-A73P-01A
45 years, female, white, stage:Stage IB, alive, 483 days
1553.4
TCGA-EK-A2RC-01A
33 years, female, stage:Stage IB, alive, 129 days
1529.7
TCGA-EA-A4BA-01A
49 years, female, white, stage:Stage IB, alive, 755 days
1516.2
TCGA-C5-A1MQ-01A
35 years, female, white, stage:Stage IIA, alive, 1031 days
1492.1
TCGA-EK-A2RO-01A
59 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
1480.9
TCGA-EK-A2IR-01A
48 years, female, white, stage:Stage IB, alive, 3442 days
1480.2
TCGA-MY-A5BE-01A
42 years, female, black or african american, stage:Stage IB, alive, 1066 days
1464.3
TCGA-VS-A9UR-01A
53 years, female, white, stage:Stage IIA, alive, 793 days
1462.1
TCGA-DS-A1OA-01A
77 years, female, asian, stage:Stage IB, dead, 879 days
1458.4
TCGA-FU-A3HY-01A
47 years, female, white, stage:Stage IB, alive, 954 days
1445.7
TCGA-FU-A40J-01A
38 years, female, white, stage:Stage IIIB, alive, 426 days
1431.4
TCGA-DS-A1OB-01A
45 years, female, white, stage:Stage IB, dead, 861 days
1421.5
TCGA-C5-A8YT-01A
36 years, female, white, stage:Stage IB, dead, 633 days
1415.9
TCGA-EK-A2PK-01A
43 years, female, white, stage:Stage IB, alive, 12 days
1402.1
TCGA-EK-A2H1-01A
20 years, female, white, stage:Stage IB, alive, 799 days
1379.5
TCGA-EA-A5ZD-01A
40 years, female, asian, stage:Stage IB, alive, 830 days
1360.3
TCGA-IR-A3LA-01A
60 years, female, white, stage:Stage IB, alive, 4172 days
1334.4
TCGA-EA-A3HR-01A
57 years, female, white, stage:Stage II, alive, 940 days
1333.9
TCGA-EA-A3Y4-01A
40 years, female, white, stage:Stage IB, alive, 1122 days
1333.4
TCGA-EK-A2RB-01A
48 years, female, white, stage:Stage IVB, alive, 9 days
1332.2
TCGA-C5-A905-01A
37 years, female, black or african american, stage:Stage IB, alive, 4879 days
1322.7
TCGA-VS-A9U7-01A
30 years, female, white, stage:Stage IB, alive, 1472 days
1321.9
TCGA-MY-A5BF-01A
68 years, female, white, stage:Stage IIA, alive, 634 days
1313.5
TCGA-VS-A958-01A
46 years, female, white, stage:Stage IIB, alive, 1525 days
1312.8
TCGA-Q1-A5R2-01A
64 years, female, white, stage:'--, alive, 499 days
1300.1
TCGA-VS-A8EL-01A
38 years, female, black or african american, stage:Stage IIB, alive, 1992 days
1297.1
TCGA-JX-A3Q8-01A
40 years, female, asian, stage:Stage IB, alive, 1357 days
1285.1
TCGA-VS-A8QH-01A
76 years, female, white, stage:Stage IB, dead, 1210 days
1284.1
TCGA-JW-A69B-01A
44 years, female, white, stage:Stage IB, alive, 863 days
1282.7
TCGA-VS-AA62-01A
51 years, female, white, stage:Stage IIB, dead, 469 days
1266.5
TCGA-VS-A9UB-01A
54 years, female, stage:Stage IIB, alive, 911 days
1262.3
TCGA-HM-A3JJ-01A
40 years, female, black or african american, stage:Stage IB, dead, 659 days
1257.7
TCGA-C5-A7CO-01A
68 years, female, white, stage:Stage IB, alive, 4482 days
1256.8
TCGA-EK-A2RL-01A
32 years, female, black or african american, stage:Stage IB, dead, 1453 days
1252.8
TCGA-EK-A2PG-01A
88 years, female, black or african american, stage:'--, alive, 46 days
1244.2
TCGA-VS-A952-01A
66 years, female, white, stage:Stage IB, alive, 1778 days
1235.7
TCGA-EK-A3GJ-01A
51 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
1227.9
TCGA-DS-A0VN-01A
47 years, female, white, stage:Stage IB, alive, 3609 days
1227.2
TCGA-C5-A1MK-01A
79 years, female, white, stage:Stage IIIB, dead, 74 days
1218.8
TCGA-UC-A7PG-01A
44 years, female, white, stage:Stage IIIB, dead, 370 days
1218.1
TCGA-EK-A3GK-01A
33 years, female, white, stage:Stage IB, alive, 15 days
1205.9
TCGA-JX-A3Q0-01A
63 years, female, black or african american, stage:Stage III, alive, 6375 days
1201.0
TCGA-EX-A449-01A
42 years, female, white, stage:Stage IVB, alive, 447 days
1179.1
TCGA-VS-A9UV-01A
74 years, female, stage:Stage IVA, dead, 104 days
1167.6
TCGA-C5-A1MN-01A
42 years, female, white, stage:Stage IIIB, dead, 1245 days
1166.4
TCGA-EK-A2RJ-01A
51 years, female, white, stage:Stage IB, alive, 53 days
1156.9
TCGA-LP-A4AU-01A
35 years, female, asian, stage:Stage IIIB, alive, 343 days
1152.5
TCGA-DS-A0VL-01A
25 years, female, white, stage:Stage IB, dead, 1692 days
1149.8
TCGA-EX-A69L-01A
41 years, female, asian, stage:Stage IB, alive, 602 days
1141.7
TCGA-C5-A7CG-01A
55 years, female, white, stage:Stage IB, alive, 6408 days
1141.1
TCGA-DG-A2KK-01A
51 years, female, stage:Stage IIIB, alive, 2496 days
1134.0
TCGA-VS-A8QM-01A
47 years, female, stage:Stage IVB, dead, 951 days
1130.7
TCGA-BI-A20A-01A
49 years, female, white, stage:Stage IB, alive, 720 days
1130.4
TCGA-Q1-A5R3-01A
56 years, female, white, stage:'--, alive, 485 days
1129.2
TCGA-Q1-A73O-01A
37 years, female, stage:Stage IB, alive, 428 days
1129.2
TCGA-MA-AA3X-01A
50 years, female, black or african american, stage:Stage IIIB, alive, 617 days
1128.3
TCGA-C5-A2M2-01A
56 years, female, white, stage:Stage IB, dead, 1011 days
1126.0
TCGA-Q1-A6DV-01A
36 years, female, asian, stage:Stage IB, alive, 491 days
1120.3
TCGA-JW-A5VL-01A
37 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
1117.4
TCGA-EK-A2RK-01A
67 years, female, white, stage:Stage IA, alive, 13 days
1108.8
TCGA-DS-A1OD-01A
49 years, female, white, stage:Stage IB, alive, 3874 days
1099.5
TCGA-VS-A94Z-01A
38 years, female, white, stage:Stage IIB, alive, 1015 days
1094.7
TCGA-ZJ-AAX4-01A
85 years, female, white, stage:Stage II, alive, 21 days
1084.5
TCGA-JX-A5QV-01A
37 years, female, white, stage:Stage IB, alive, 636 days
1081.6
TCGA-EX-A3L1-01A
32 years, female, white, stage:Stage IIA, alive, 463 days
1074.7
TCGA-DS-A7WF-01A
41 years, female, stage:Stage IB, dead, 492 days
1073.5
TCGA-MA-AA43-01A
48 years, female, white, stage:Stage IIIB, alive, 346 days
1066.3
TCGA-R2-A69V-01A
42 years, female, white, stage:Stage IB, alive, 596 days
1055.9
TCGA-EK-A2RE-01A
26 years, female, white, stage:Stage IIA, alive, 57 days
1052.6
TCGA-DS-A5RQ-01A
80 years, female, white, stage:Stage IB, alive, 512 days
1041.4
TCGA-IR-A3LB-01A
53 years, female, white, stage:Stage IB, dead, 2032 days
1033.8
TCGA-EK-A2GZ-01A
64 years, female, black or african american, stage:Stage IIIB, alive, 383 days
1027.3
TCGA-MA-AA42-01A
75 years, female, white, stage:Stage IIB, alive, 259 days
1026.0
TCGA-IR-A3LL-01A
60 years, female, white, stage:Stage IB, alive, 1106 days
1024.6
TCGA-EK-A3GN-01A
47 years, female, white, stage:Stage IIIB, alive, 27 days
1024.5
TCGA-FU-A5XV-01A
32 years, female, white, stage:Stage IIIB, alive, 321 days
1024.4
TCGA-4J-AA1J-01A
31 years, female, white, stage:Stage IB, alive, 542 days
1023.7
TCGA-C5-A907-01A
47 years, female, white, stage:Stage IB, alive, 448 days
997.2
TCGA-VS-A9UY-01A
29 years, female, stage:Stage IVB, dead, 555 days
986.9
TCGA-C5-A8XI-01A
69 years, female, black or african american, stage:Stage IB, alive, 254 days
983.5
TCGA-EA-A50E-01A
45 years, female, asian, stage:Stage IVA, dead, 227 days
983.3
TCGA-C5-A7CK-01A
58 years, female, white, stage:Stage IVA, dead, 4086 days
982.8
TCGA-C5-A7UE-01A
45 years, female, white, stage:Stage IB, alive, 4738 days
969.1
TCGA-BI-A0VS-01A
48 years, female, white, stage:Stage IB, alive, 1735 days
957.4
TCGA-C5-A7UI-01A
42 years, female, black or african american, stage:Stage IB, dead, 2888 days
944.8
TCGA-JW-A5VK-01A
43 years, female, black or african american, stage:Stage IB, alive, 623 days
941.4
TCGA-Q1-A73R-01A
45 years, female, white, stage:Stage I, alive, 567 days
939.3
TCGA-EA-A410-01A
51 years, female, white, stage:Stage IIA, alive, 803 days
937.6
TCGA-MU-A8JM-01A
46 years, female, white, stage:Stage IB, alive, 607 days
927.1
TCGA-IR-A3LF-01A
64 years, female, white, stage:Stage IB, alive, 2949 days
917.4
TCGA-C5-A1MI-01A
50 years, female, white, stage:Stage IB, dead, 1083 days
917.2
TCGA-HM-A4S6-01A
51 years, female, white, stage:Stage IIIB, alive, 454 days
912.0
TCGA-MU-A51Y-01A
27 years, female, white, stage:Stage IIA, alive, 854 days
910.8
TCGA-C5-A7UH-01A
55 years, female, white, stage:Stage IIIB, alive, 3988 days
894.1
TCGA-DS-A0VM-01A
51 years, female, white, stage:Stage IB, alive, 3589 days
893.9
TCGA-C5-A3HL-01A
76 years, female, white, stage:Stage IB, alive, 621 days
892.8
TCGA-FU-A3TQ-01A
55 years, female, white, stage:Stage IIIB, alive, 795 days
890.6
TCGA-C5-A2LS-01A
37 years, female, white, stage:Stage IB, alive, 1345 days
888.4
TCGA-FU-A3YQ-01A
35 years, female, white, stage:Stage IB, alive, 861 days
886.1
TCGA-DS-A3LQ-01A
46 years, female, stage:Stage IIIB, alive, 699 days
874.0
TCGA-VS-A8EJ-01A
60 years, female, white, stage:Stage IIB, dead, 607 days
873.5
TCGA-VS-A9V3-01A
62 years, female, white, stage:Stage IVB, alive, 540 days
871.6
TCGA-IR-A3LI-01A
48 years, female, white, stage:Stage IVB, alive, 2493 days
868.7
TCGA-FU-A770-01A
33 years, female, white, stage:Stage IIIB, alive, 34 days
867.2
TCGA-ZX-AA5X-01A
64 years, female, white, stage:Stage IIIB, alive, 119 days
863.3
TCGA-ZJ-A8QR-01A
38 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
861.4
TCGA-C5-A1MH-01A
71 years, female, white, stage:Stage IIIB, dead, 1186 days
860.9
TCGA-EA-A439-01A
50 years, female, asian, stage:Stage IIA, alive, 965 days
859.4
TCGA-C5-A1BM-01A
78 years, female, black or african american, stage:Stage IB, dead, 2520 days
858.2
TCGA-C5-A1BL-01A
32 years, female, white, stage:Stage IB, alive, 5271 days
855.7
TCGA-C5-A8XK-01A
30 years, female, black or african american, stage:'--, alive, 3039 days
846.6
TCGA-EX-A8YF-01A
44 years, female, white, stage:Stage IB, alive, 473 days
840.4
TCGA-EA-A44S-01A
31 years, female, white, stage:Stage IIIB, alive, 369 days
840.1
TCGA-VS-A9UC-01A
32 years, female, stage:Stage IIB, alive, 825 days
835.8
TCGA-EA-A3QE-01A
45 years, female, white, stage:Stage IB, alive, 761 days
833.8
TCGA-VS-A9UQ-01A
32 years, female, stage:Stage IB, alive, 1263 days
830.9
TCGA-VS-A9UM-01A
39 years, female, black or african american, stage:Stage IVB, dead, 829 days
828.4
TCGA-IR-A3LK-01A
69 years, female, white, stage:Stage IB, dead, 908 days
814.3
TCGA-EA-A6QX-01A
49 years, female, asian, stage:Stage IIIB, alive, 730 days
813.5
TCGA-VS-A9UZ-01A
61 years, female, white, stage:Stage IB, alive, 2044 days
804.5
TCGA-EA-A1QT-01A
47 years, female, white, stage:Stage IB, alive, 1243 days
802.5
TCGA-VS-A9UH-01A
53 years, female, black or african american, stage:Stage IVA, alive, 1427 days
791.9
TCGA-DG-A2KL-01A
53 years, female, stage:Stage IIA, alive, 1367 days
783.9
TCGA-EA-A78R-01A
54 years, female, asian, stage:Stage IB, alive, 410 days
773.2
TCGA-EA-A97N-01A
38 years, female, white, stage:Stage IB, alive, 11 days
766.8
TCGA-VS-A9V0-01A
58 years, female, stage:Stage IB, alive, 573 days
763.2
TCGA-VS-A8EG-01A
36 years, female, stage:Stage IB, alive, 1386 days
760.0
TCGA-HG-A2PA-01A
38 years, female, white, stage:Stage IB, dead, 773 days
757.5
TCGA-C5-A7CH-01A
43 years, female, white, stage:Stage IIB, alive, 4694 days
747.8
TCGA-Q1-A73Q-01A
46 years, female, white, stage:Stage I, alive, 284 days
745.0
TCGA-VS-A9V2-01A
29 years, female, white, stage:Stage IB, alive, 555 days
743.2
TCGA-C5-A902-01A
35 years, female, black or african american, stage:Stage IB, alive, 149 days
739.8
TCGA-C5-A8XH-01A
39 years, female, white, stage:Stage IB, dead, 1394 days
723.7
TCGA-VS-A9UJ-01A
55 years, female, stage:Stage IIB, dead, 52 days
721.0
TCGA-XS-A8TJ-01A
41 years, female, black or african american, stage:Stage IB, alive, 890 days
719.2
TCGA-C5-A1M6-01A
55 years, female, white, stage:Stage IIB, dead, 955 days
717.8
TCGA-BI-A0VR-01A
53 years, female, white, stage:Stage IIIB, alive, 1505 days
713.8
TCGA-C5-A1M8-01A
43 years, female, white, stage:Stage IB, alive, 919 days
709.9
TCGA-VS-A9U6-01A
52 years, female, white, stage:Stage IVB, alive, 1320 days
706.8
TCGA-C5-A7XC-01A
26 years, female, white, stage:Stage IB, alive, 1551 days
698.3
TCGA-C5-A1M7-01A
37 years, female, white, stage:Stage IB, alive, 1409 days
678.1
TCGA-FU-A23L-01A
60 years, female, white, stage:Stage IIA, alive, 725 days
664.8
TCGA-LP-A5U3-01A
40 years, female, asian, stage:Stage IB, alive, 25 days
652.9
TCGA-WL-A834-01A
57 years, female, white, stage:'--, alive, 791 days
646.7
TCGA-MA-AA3Z-01A
43 years, female, white, stage:Stage IB, alive, 595 days
640.9
TCGA-VS-A9UD-01A
73 years, female, white, stage:Stage IIIA, alive, 739 days
631.3
TCGA-VS-A9UI-01A
76 years, female, white, stage:Stage IIB, dead, 1372 days
624.9
TCGA-VS-A94Y-01A
47 years, female, white, stage:Stage IIB, dead, 144 days
614.6
TCGA-FU-A23K-01A
28 years, female, white, stage:Stage IIIB, alive, 372 days
610.6
TCGA-DG-A2KM-01A
46 years, female, stage:Stage IB, alive, 1946 days
607.9
TCGA-DR-A0ZL-01A
53 years, female, asian, stage:Stage IB, alive, 2669 days
606.3
TCGA-C5-A7X8-01A
35 years, female, white, stage:Stage IB, alive, 83 days
599.2
TCGA-VS-A950-01A
42 years, female, stage:Stage IIIA, alive, 1221 days
593.3
TCGA-LP-A4AX-01A
45 years, female, asian, stage:Stage IB, alive, 380 days
587.8
TCGA-VS-A8EK-01A
65 years, female, white, stage:Stage IVA, dead, 829 days
580.4
TCGA-VS-A8QF-01A
42 years, female, white, stage:Stage IIB, alive, 1800 days
567.8
TCGA-EX-A1H5-01A
58 years, female, black or african american, stage:Stage IIB, alive, 619 days
550.0
TCGA-EK-A2RM-01A
40 years, female, white, stage:Stage IB, alive, 50 days
548.7
TCGA-Q1-A6DW-01A
44 years, female, white, stage:Stage I, alive, 534 days
548.3
TCGA-VS-A8Q9-01A
79 years, female, white, stage:Stage IB, alive, 1630 days
537.4
TCGA-EA-A411-01A
50 years, female, white, stage:Stage IB, alive, 747 days
524.0
TCGA-C5-A2LX-01A
54 years, female, white, stage:Stage IB, alive, 2526 days
513.1
TCGA-VS-A9V1-01A
46 years, female, white, stage:Stage IVB, dead, 157 days
499.7
TCGA-C5-A8XJ-01A
74 years, female, white, stage:Stage IB, alive, 4467 days
499.2
TCGA-DG-A2KJ-01A
50 years, female, stage:Stage IIIB, alive, 2893 days
485.2
TCGA-FU-A3WB-01A
43 years, female, white, stage:Stage IIA, alive, 491 days
459.8
TCGA-VS-A8EI-01A
38 years, female, white, stage:Stage IIB, alive, 729 days
440.4
TCGA-VS-A9UO-01A
43 years, female, white, stage:Stage IIB, alive, 1456 days
436.0
TCGA-EA-A556-01A
38 years, female, white, stage:Stage IB, alive, 453 days
423.3
TCGA-C5-A3HE-01A
44 years, female, white, stage:Stage IB, alive, 548 days
386.0
TCGA-DS-A7WI-01A
43 years, female, white, stage:Stage IIA, dead, 252 days
380.4
TCGA-JX-A3PZ-01A
25 years, female, white, stage:Stage IB, dead, 642 days
368.4
TCGA-C5-A1ME-01A
40 years, female, white, stage:Stage IB, alive, 1756 days
363.2
TCGA-FU-A3HZ-01A
64 years, female, white, stage:Stage IIA, alive, 1103 days
338.1
TCGA-JW-A5VH-01A
53 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
332.3
TCGA-VS-A954-01A
67 years, female, stage:Stage IIIB, alive, 1714 days
328.2
TCGA-C5-A2LV-01A
36 years, female, black or african american, stage:Stage IB, alive, 2234 days
323.3
TCGA-ZJ-A8QQ-01A
24 years, female, white, stage:Stage IIB, alive, 2056 days
323.2
TCGA-C5-A1MJ-01A
61 years, female, white, stage:Stage IB, dead, 14 days
301.9
TCGA-LP-A7HU-01A
53 years, female, asian, stage:Stage II, alive, 406 days
292.8
TCGA-HM-A3JK-01A
64 years, female, white, stage:Stage IIA, alive, 632 days
279.3
TCGA-MA-AA41-01A
33 years, female, white, stage:Stage IIB, alive, 279 days
277.7
TCGA-JW-A852-01A
42 years, female, white, stage:Stage IIB, dead, 252 days
275.1
TCGA-C5-A7X3-01A
70 years, female, white, stage:Stage IIIB, dead, 284 days
274.6
TCGA-C5-A0TN-01A
21 years, female, black or african american, stage:Stage IB, dead, 348 days
270.7
TCGA-MY-A5BD-01A
62 years, female, white, stage:Stage IIB, alive, 1667 days
262.3
TCGA-JW-A5VG-01A
35 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
258.2
TCGA-C5-A3HF-01A
24 years, female, white, stage:Stage IB, dead, 543 days
257.9
TCGA-UC-A7PD-01A
21 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
250.6
TCGA-EA-A5O9-01A
39 years, female, white, stage:Stage IB, alive, 788 days
247.2
TCGA-FU-A3TX-01A
78 years, female, stage:Stage IB, alive, 45 days
239.4
TCGA-C5-A7CM-01A
35 years, female, white, stage:Stage IB, alive, 619 days
239.3
TCGA-JW-AAVH-01A
46 years, female, white, stage:Stage IB, alive, 552 days
239.0
TCGA-ZJ-AAXU-01A
51 years, female, white, stage:Stage IIB, alive, 5 days
234.8
TCGA-IR-A3L7-01A
37 years, female, white, stage:Stage IB, alive, 4483 days
232.6
TCGA-C5-A1BJ-01A
34 years, female, white, stage:Stage IIB, alive, 4385 days
221.4
TCGA-ZJ-AAXA-01A
64 years, female, white, stage:Stage IB, alive, 43 days
219.1
TCGA-C5-A1M5-01A
53 years, female, white, stage:Stage IB, dead, 2052 days
209.1
TCGA-EA-A3HS-01A
35 years, female, white, stage:Stage IB, alive, 959 days
207.0
TCGA-UC-A7PI-01A
44 years, female, white, stage:Stage IB, alive, 2114 days
199.3
TCGA-EK-A2PI-01A
44 years, female, white, stage:Stage IIIB, alive, 586 days
199.2
TCGA-C5-A1ML-01A
49 years, female, white, stage:Stage IB, dead, 636 days
195.6
TCGA-PN-A8MA-01A
43 years, female, black or african american, stage:Stage IIB, alive, 90 days
193.5
TCGA-C5-A7X5-01A
72 years, female, black or african american, stage:Stage IVB, dead, 414 days
193.4
TCGA-EA-A43B-01A
43 years, female, white, stage:Stage IB, alive, 791 days
192.5
TCGA-VS-A8QC-01A
51 years, female, white, stage:Stage IVA, dead, 350 days
192.3
TCGA-VS-A8QA-01A
44 years, female, stage:Stage IB, alive, 1099 days
191.9
TCGA-DS-A1O9-01A
75 years, female, white, stage:Stage IVA, dead, 266 days
191.1
TCGA-IR-A3LC-01A
40 years, female, white, stage:Stage IB, alive, 3935 days
188.0
TCGA-Q1-A5R1-01A
32 years, female, white, stage:Stage IB, alive, 474 days
185.9
TCGA-VS-A94W-01A
39 years, female, white, stage:Stage IIB, alive, 1243 days
180.2
TCGA-FU-A2QG-01A
29 years, female, white, stage:Stage IB, alive, 579 days
176.5
TCGA-DR-A0ZM-01A
61 years, female, white, stage:Stage IIIB, alive, 1791 days
175.5
TCGA-JW-A5VI-01A
45 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
174.6
TCGA-C5-A901-01A
44 years, female, white, stage:'--, alive, 518 days
170.3
TCGA-EA-A3HQ-01A
60 years, female, white, stage:Stage II, alive, 1136 days
165.1
TCGA-EK-A2RA-01A
74 years, female, stage:Stage IIA, alive, 1246 days
164.6
TCGA-C5-A2LZ-01A
65 years, female, white, stage:Stage IIIB, dead, 3046 days
159.7
TCGA-VS-A9UU-01A
42 years, female, stage:Stage IIB, alive, 442 days
158.7
TCGA-EA-A3HU-01A
43 years, female, white, stage:Stage II, alive, 1013 days
154.4
TCGA-VS-A9V5-01A
50 years, female, white, stage:Stage IIB, dead, 494 days
149.5
TCGA-EA-A3HT-01A
68 years, female, white, stage:Stage IB, alive, 954 days
139.3
TCGA-GH-A9DA-01A
27 years, female, white, stage:Stage IB, alive, 540 days
138.1
TCGA-EK-A2R7-01A
45 years, female, white, stage:Stage IB, alive, 27 days
137.7
TCGA-C5-A8YR-01A
56 years, female, white, stage:Stage IB, dead, 837 days
135.8
TCGA-MA-AA3Y-01A
48 years, female, white, stage:Stage IB, alive, 542 days
132.9
TCGA-VS-A9UP-01A
43 years, female, stage:Stage IIA, alive, 1444 days
132.8
TCGA-UC-A7PF-01A
44 years, female, stage:Stage IB, dead, 2859 days
132.1
TCGA-MA-AA3W-01A
54 years, female, white, stage:Stage IB, alive, 685 days
130.8
TCGA-C5-A1MP-01A
34 years, female, black or african american, stage:Stage IB, alive, 109 days
128.1
TCGA-DS-A1OC-01A
47 years, female, white, stage:Stage IB, alive, 376 days
127.7
TCGA-C5-A7CJ-01A
42 years, female, white, stage:Stage IIA, dead, 3097 days
127.5
TCGA-IR-A3LH-01A
49 years, female, black or african american, stage:Stage IIA, alive, 2394 days
124.6
TCGA-FU-A3NI-01A
45 years, female, white, stage:Stage IB, dead, 638 days
124.3
TCGA-EK-A2IP-01A
28 years, female, white, stage:Stage IB, alive, 202 days
121.6
TCGA-C5-A7CL-01A
48 years, female, white, stage:Stage IIIB, dead, 471 days
120.2
TCGA-VS-A9UL-01A
79 years, female, white, stage:Stage IIIB, dead, 442 days
115.3
TCGA-EA-A1QS-01A
46 years, female, white, stage:Stage IB, alive, 1203 days
114.3
TCGA-DS-A7WH-01A
34 years, female, white, stage:Stage IB, alive, 533 days
112.4
TCGA-C5-A2LY-01A
30 years, female, white, stage:Stage IB, alive, 2383 days
110.4
TCGA-VS-A8Q8-01A
26 years, female, white, stage:Stage IB, dead, 978 days
105.8
TCGA-EK-A2PL-01A
36 years, female, white, stage:Stage IIIB, alive, 13 days
103.8
TCGA-LP-A4AW-01A
52 years, female, asian, stage:Stage IA, alive, 27 days
103.1
TCGA-VS-A8EB-01A
41 years, female, white, stage:Stage IIIB, dead, 305 days
102.2
TCGA-VS-A8EH-01A
56 years, female, stage:Stage IIIB, alive, 986 days
99.7
TCGA-EA-A5ZE-01A
54 years, female, asian, stage:Stage IB, alive, 829 days
86.7
TCGA-VS-A94X-01A
40 years, female, black or african american, stage:Stage IIB, dead, 506 days
85.7
TCGA-EX-A69M-01A
62 years, female, white, stage:Stage IB, dead, 253 days
80.8
TCGA-VS-A957-01A
64 years, female, white, stage:Stage IB, alive, 1688 days
80.1
TCGA-DS-A0VK-01A
45 years, female, white, stage:Stage IB, dead, 1118 days
78.3
TCGA-JW-A5VJ-01A
56 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
70.3
TCGA-EA-A5ZF-01A
56 years, female, asian, stage:Stage IB, alive, 828 days
67.8
TCGA-Q1-A6DT-01A
55 years, female, white, stage:Stage I, dead, 275 days
67.3
TCGA-EK-A2RN-01A
45 years, female, white, stage:Stage IB, alive, 71 days
61.0
TCGA-VS-A959-01A
76 years, female, stage:Stage IIB, alive, 1561 days
37.9
TCGA-VS-A9UT-01A
72 years, female, asian, stage:Stage IB, alive, 482 days
30.7
TCGA-VS-A9U5-01A
57 years, female, white, stage:Stage IIB, alive, 1535 days
0.0
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.