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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
640.2
nTPM
GTEx:
640.2
nTPM
FANTOM5:
281.3
Scaled Tags Per Million
Pig:
85.6
nTPM
Mouse:
487.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
640.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 640.2
Samples: 105
Max nTPM: 1228.6
Min nTPM: 429.6
Std nTPM: 116.8
Median nTPM:
491_1
89 years, female
1228.6
35_1
74 years, female
918.8
153_1
70 years, female
879.1
495_1
57 years, female
873.9
490_1
67 years, female
826.3
389_1
86 years, female
822.7
308_1
70 years, female
793.8
414_1
84 years, female
790.7
139_1
64 years, female
777.6
384_1
83 years, male
769.2
466_1
57 years, female
767.6
162_1
79 years, female
759.4
17_1
71 years, male
757.2
379_1
60 years, male
749.0
120_1
70 years, female
748.3
375_1
74 years, female
744.5
119_1
70 years, female
741.5
396_1
62 years, male
740.3
413_1
59 years, female
740.0
126_1
63 years, male
737.6
4_1
88 years, female
736.3
321_1
62 years, female
735.3
315_1
62 years, female
734.5
145_1
84 years, male
722.4
347_1
72 years, male
718.8
307_1
66 years, female
717.2
322_1
76 years, male
711.9
415_1
77 years, female
708.9
137_1
83 years, male
707.0
501_1
88 years, male
706.6
311_1
78 years, male
696.5
355_1
70 years, female
694.0
246_1
77 years, male
692.1
89_1
63 years, male
685.6
109_1
81 years, female
683.0
386_1
76 years, male
682.9
452_1
88 years, female
676.8
142_1
61 years, female
675.4
2_1
77 years, female
667.1
526_1
61 years, male
664.3
394_1
75 years, female
662.2
518_1
75 years, female
661.3
32_1
67 years, male
660.7
6_1
73 years, female
652.2
99_1
64 years, male
645.3
218_1
71 years, female
644.6
265_1
87 years, male
642.6
404_1
82 years, female
642.3
41_1
94 years, female
639.5
377_1
82 years, female
631.0
217_1
76 years, male
630.6
499_1
55 years, female
628.7
149_1
88 years, male
624.6
117_1
61 years, male
623.7
42_1
85 years, male
621.5
189_1
76 years, male
617.7
376_1
75 years, female
617.4
81_1
67 years, male
615.3
320_1
89 years, female
614.5
18_1
88 years, male
613.3
314_1
67 years, male
603.2
405_1
91 years, male
602.1
254_1
77 years, female
601.1
353_1
82 years, female
594.8
468_1
89 years, male
593.3
173_1
67 years, male
591.9
313_1
79 years, female
589.0
354_1
81 years, female
588.7
447_1
81 years, male
588.3
317_1
60 years, male
587.7
251_1
78 years, male
584.8
319_1
81 years, male
578.2
237_1
82 years, male
577.8
266_1
85 years, male
577.3
324_1
76 years, male
573.8
348_1
84 years, male
570.7
295_1
61 years, female
567.9
503_1
68 years, male
563.8
316_1
62 years, male
559.7
351_1
91 years, male
556.2
349_1
83 years, male
554.9
243_1
75 years, male
554.4
9_1
66 years, female
553.4
288_1
66 years, female
549.0
43_1
64 years, female
548.1
115_1
83 years, male
538.8
286_1
68 years, female
535.5
335_1
73 years, female
532.0
229_1
69 years, female
530.7
172_1
72 years, female
523.0
352_1
62 years, male
521.3
291_1
76 years, male
521.1
517_1
88 years, male
513.4
318_1
68 years, male
504.4
350_1
84 years, female
502.7
264_1
73 years, female
496.8
425_1
59 years, female
493.7
506_1
65 years, male
492.9
480_1
63 years, male
492.0
406_1
79 years, male
479.1
356_1
87 years, female
478.2
177_1
74 years, male
461.2
292_1
71 years, male
458.4
163_1
78 years, male
432.0
293_1
68 years, female
429.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.