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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
605.4
nTPM
HPA Brain:
285.8
nTPM
GTEx:
605.4
nTPM
FANTOM5:
125.6
Scaled Tags Per Million
Pig:
131.2
nTPM
Mouse:
411.5
nTPM
Allen mouse:
0.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
285.8
Sample id
Sample description
nTPM
Amygdala nTPM: 285.8
2695
Female, age 67, right hemisphere
343.0
2814
Male, age 76, right hemisphere
311.1
2514
Male, age 75, right hemisphere
278.3
1987
Female, age 91, left hemisphere
261.1
2517
Female, age 94, left hemisphere
235.4
Basal amygdala nTPM: 207.4
2827
Female, age 67, right hemisphere
280.4
2609
Male, age 75, right hemisphere
220.8
1955
Male, age 76, both hemispheres
203.4
2685
Female, age 94, left hemisphere
203.4
2110
Male, age 80, left hemisphere
190.7
2243
Female, age 91, right hemisphere
145.7
Central amygdala nTPM: 245.0
2826
Female, age 94, left hemisphere
378.9
2515
Male, age 75, right hemisphere
265.7
1905
Male, age 76, both hemispheres
253.6
2701
Female, age 91, right hemisphere
167.6
2239
Male, age 80, left hemisphere
159.4
Corticomedial amygdala nTPM: 189.0
2428
Male, age 75, right hemisphere
238.3
2535
Female, age 67, right hemisphere
196.1
2240
Male, age 76, both hemispheres
182.9
2829
Male, age 80, left hemisphere
180.7
2429
Female, age 94, left hemisphere
173.6
2242
Female, age 91, right hemisphere
162.5
Lateral amygdala nTPM: 253.3
2830
Female, age 67, right hemisphere
386.6
2516
Male, age 75, right hemisphere
315.2
2534
Female, age 94, left hemisphere
280.4
1883
Male, age 76, both hemispheres
215.4
2256
Male, age 80, left hemisphere
187.6
2255
Female, age 91, right hemisphere
134.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
605.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 605.4
Samples: 152
Max nTPM: 2011.1
Min nTPM: 278.5
Std nTPM: 296.4
Median nTPM: 526.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
2011.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1818.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1797.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1633.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1518.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1501.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1288.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1163.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1157.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
1147.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
973.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
970.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
943.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
937.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
896.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
880.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
874.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
850.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
848.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
844.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
831.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
830.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
829.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
829.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
806.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
801.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
799.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
789.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
782.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
768.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
742.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
741.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
713.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
706.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
705.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
699.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
691.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
686.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
666.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
664.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
642.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
641.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
638.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
637.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
632.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
632.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
630.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
628.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
620.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
611.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
606.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
605.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
603.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
599.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
596.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
592.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
582.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
580.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
579.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
571.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
561.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
560.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
559.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
555.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
551.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
547.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
546.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
544.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
543.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
541.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
539.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
537.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
536.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
531.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
528.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
527.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
525.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
525.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
523.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
522.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
517.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
510.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
508.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
504.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
502.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
501.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
500.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
499.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
493.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
491.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
489.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
483.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
479.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
477.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
475.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
470.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
470.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
469.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
458.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
455.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
455.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
450.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
450.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
449.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
447.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
446.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
443.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
439.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
438.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
436.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
436.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
430.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
429.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
418.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
418.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
418.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
416.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
415.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
415.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
411.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
411.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
409.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
404.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
402.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
398.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
398.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
397.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
394.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
384.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
382.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
380.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
379.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
377.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
373.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
372.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
366.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
364.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
362.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
356.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
350.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
349.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
339.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
327.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
327.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
321.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
319.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
303.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
296.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
295.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
291.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
285.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
278.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
411.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 411.5
Samples: 4
Max nTPM: 473.4
Min nTPM: 384.6
Sample A
Male
392.8
Sample B
Male
395.3
Sample C
Female
473.4
Sample D
Female
384.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.