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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
337.3
nTPM
HPA Brain:
754.4
nTPM
GTEx:
337.3
nTPM
FANTOM5:
1097.9
Scaled Tags Per Million
Pig:
852.3
nTPM
Mouse:
488.7
nTPM
Allen mouse:
14.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
754.4
Sample id
Sample description
nTPM
Amygdala nTPM: 753.4
2514
Male, age 75, right hemisphere
1437.9
2517
Female, age 94, left hemisphere
836.7
1987
Female, age 91, left hemisphere
668.2
2695
Female, age 67, right hemisphere
415.4
2814
Male, age 76, right hemisphere
408.9
Basal amygdala nTPM: 754.4
2609
Male, age 75, right hemisphere
1247.5
2243
Female, age 91, right hemisphere
865.0
2110
Male, age 80, left hemisphere
832.0
2685
Female, age 94, left hemisphere
667.3
1955
Male, age 76, both hemispheres
515.8
2827
Female, age 67, right hemisphere
398.7
Central amygdala nTPM: 624.1
2826
Female, age 94, left hemisphere
770.8
2239
Male, age 80, left hemisphere
761.1
2515
Male, age 75, right hemisphere
634.2
2701
Female, age 91, right hemisphere
495.1
1905
Male, age 76, both hemispheres
459.4
Corticomedial amygdala nTPM: 744.0
2428
Male, age 75, right hemisphere
1078.2
2829
Male, age 80, left hemisphere
915.6
2242
Female, age 91, right hemisphere
757.0
2429
Female, age 94, left hemisphere
728.8
2535
Female, age 67, right hemisphere
510.9
2240
Male, age 76, both hemispheres
473.5
Lateral amygdala nTPM: 684.0
2516
Male, age 75, right hemisphere
1061.2
2534
Female, age 94, left hemisphere
757.5
2255
Female, age 91, right hemisphere
716.5
2256
Male, age 80, left hemisphere
706.7
1883
Male, age 76, both hemispheres
537.8
2830
Female, age 67, right hemisphere
324.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
337.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 337.3
Samples: 152
Max nTPM: 925.6
Min nTPM: 1.9
Std nTPM: 198.8
Median nTPM: 317.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
925.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
911.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
894.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
840.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
704.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
703.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
689.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
683.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
677.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
672.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
666.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
665.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
659.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
638.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
622.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
609.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
601.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
591.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
576.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
576.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
572.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
563.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
556.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
546.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
538.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
518.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
509.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
506.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
503.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
498.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
497.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
495.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
492.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
488.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
472.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
464.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
461.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
455.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
452.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
446.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
445.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
444.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
440.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
440.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
438.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
432.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
429.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
420.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
420.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
414.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
412.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
410.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
410.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
400.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
396.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
393.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
387.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
387.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
386.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
383.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
381.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
374.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
373.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
370.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
368.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
367.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
367.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
363.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
352.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
351.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
349.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
349.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
345.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
341.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
335.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
325.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
309.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
309.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
302.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
290.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
289.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
287.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
286.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
282.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
279.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
274.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
271.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
270.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
268.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
265.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
265.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
260.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
245.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
235.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
230.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
230.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
230.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
221.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
217.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
217.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
216.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
210.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
210.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
209.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
207.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
207.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
206.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
204.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
203.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
202.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
195.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
191.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
189.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
183.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
182.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
180.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
180.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
176.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
176.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
173.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
171.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
169.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
167.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
162.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
160.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
159.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
143.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
142.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
135.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
127.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
115.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
113.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
111.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
111.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
108.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
104.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
101.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
93.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
86.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
82.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
76.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
60.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
55.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
49.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
45.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
43.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
37.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
32.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
30.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
26.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
21.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
488.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 488.7
Samples: 4
Max nTPM: 573.4
Min nTPM: 425.0
Sample A
Male
425.0
Sample B
Male
453.4
Sample C
Female
573.4
Sample D
Female
502.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.