We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1147.2
nTPM
GTEx:
1147.2
nTPM
FANTOM5:
174.4
Scaled Tags Per Million
Pig:
703.8
nTPM
Mouse:
769.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1147.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 1147.2
Samples: 105
Max nTPM: 2282.4
Min nTPM: 303.9
Std nTPM: 380.0
Median nTPM:
322_1
76 years, male
2282.4
386_1
76 years, male
1978.5
321_1
62 years, female
1943.2
316_1
62 years, male
1938.7
379_1
60 years, male
1861.9
319_1
81 years, male
1809.7
6_1
73 years, female
1782.0
318_1
68 years, male
1685.3
377_1
82 years, female
1670.3
172_1
72 years, female
1654.7
153_1
70 years, female
1621.3
447_1
81 years, male
1616.5
145_1
84 years, male
1609.7
376_1
75 years, female
1592.3
375_1
74 years, female
1566.6
237_1
82 years, male
1563.0
354_1
81 years, female
1503.3
404_1
82 years, female
1501.0
218_1
71 years, female
1500.1
320_1
89 years, female
1482.7
35_1
74 years, female
1472.4
163_1
78 years, male
1447.3
335_1
73 years, female
1434.1
286_1
68 years, female
1415.5
2_1
77 years, female
1404.5
243_1
75 years, male
1362.3
425_1
59 years, female
1345.4
480_1
63 years, male
1340.2
394_1
75 years, female
1325.1
189_1
76 years, male
1323.2
384_1
83 years, male
1317.1
307_1
66 years, female
1316.5
173_1
67 years, male
1316.2
126_1
63 years, male
1313.6
347_1
72 years, male
1303.8
293_1
68 years, female
1300.3
355_1
70 years, female
1298.3
353_1
82 years, female
1294.1
348_1
84 years, male
1285.4
405_1
91 years, male
1283.4
350_1
84 years, female
1269.9
506_1
65 years, male
1256.8
518_1
75 years, female
1232.1
115_1
83 years, male
1228.9
526_1
61 years, male
1228.6
406_1
79 years, male
1227.7
177_1
74 years, male
1224.8
229_1
69 years, female
1222.0
311_1
78 years, male
1196.8
356_1
87 years, female
1192.7
352_1
62 years, male
1191.1
291_1
76 years, male
1181.5
389_1
86 years, female
1164.3
396_1
62 years, male
1135.5
251_1
78 years, male
1128.2
246_1
77 years, male
1110.4
452_1
88 years, female
1102.4
351_1
91 years, male
1077.1
292_1
71 years, male
1074.1
4_1
88 years, female
1073.8
468_1
89 years, male
1050.2
295_1
61 years, female
1019.9
288_1
66 years, female
1013.4
81_1
67 years, male
1012.4
120_1
70 years, female
994.0
349_1
83 years, male
983.5
254_1
77 years, female
982.3
17_1
71 years, male
976.2
18_1
88 years, male
974.1
43_1
64 years, female
965.3
109_1
81 years, female
962.8
41_1
94 years, female
948.9
139_1
64 years, female
942.2
324_1
76 years, male
938.6
217_1
76 years, male
931.7
517_1
88 years, male
908.5
264_1
73 years, female
901.7
142_1
61 years, female
891.0
137_1
83 years, male
874.3
314_1
67 years, male
865.6
9_1
66 years, female
860.9
499_1
55 years, female
855.8
317_1
60 years, male
846.9
503_1
68 years, male
816.5
266_1
85 years, male
813.3
99_1
64 years, male
805.1
119_1
70 years, female
802.8
315_1
62 years, female
787.5
265_1
87 years, male
753.9
117_1
61 years, male
740.9
495_1
57 years, female
736.2
313_1
79 years, female
732.7
42_1
85 years, male
726.4
415_1
77 years, female
722.1
32_1
67 years, male
693.7
162_1
79 years, female
689.9
501_1
88 years, male
665.9
466_1
57 years, female
557.1
414_1
84 years, female
546.3
413_1
59 years, female
519.1
149_1
88 years, male
517.7
89_1
63 years, male
493.6
308_1
70 years, female
415.6
491_1
89 years, female
334.3
490_1
67 years, female
303.9
Show allShow less
RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.