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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
807.0
nTPM
HPA Brain:
860.0
nTPM
GTEx:
807.0
nTPM
FANTOM5:
217.3
Scaled Tags Per Million
Pig:
1540.4
nTPM
Mouse:
1315.3
nTPM
Allen mouse:
10.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
860.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 710.9
2019
Male, age 18, unknown
875.3
2586
Male, age 75, left hemisphere
855.2
1827
Male, age 72, unknown
823.7
2411
Female, age 72, unknown
802.2
2828
Female, age 72, unknown
735.3
2219
Male, age 76, both hemispheres
672.8
1833
Male, age 53, unknown
647.8
1870
Female, age 42, unknown
612.2
1830
Male, age 51, unknown
587.9
2666
Male, age 74, left hemisphere
496.1
Dorsal raphe nucleus nTPM: 824.3
2298
Female, age 72, unknown
948.0
2047
Male, age 72, unknown
920.2
1828
Male, age 53, unknown
830.6
2750
Male, age 76, both hemispheres
727.9
2016
Female, age 72, unknown
695.0
Inferior colliculus nTPM: 860.0
2097
Female, age 72, unknown
965.1
1848
Female, age 42, unknown
909.9
2849
Male, age 72, unknown
814.1
1890
Male, age 53, unknown
751.0
Median raphe nucleus nTPM: 740.0
2220
Male, age 76, midline
740.0
Periaquaductal grey, anterior nTPM: 627.9
2502
Female, age 75, unknown
663.4
1795
Male, age 51, unknown
636.5
1947
Male, age 18, unknown
583.9
Periaquaductal grey, dorsal nTPM: 674.9
2464
Female, age 72, unknown
847.9
1840
Male, age 53, unknown
705.9
2850
Male, age 76, both hemispheres
621.8
1831
Male, age 72, unknown
524.0
Periaquaductal grey, lateral nTPM: 568.0
2140
Male, age 76, both hemispheres
628.6
2053
Male, age 18, unknown
583.9
2272
Male, age 74, both hemispheres
491.4
Pretectal area nTPM: 795.9
2007
Male, age 72, unknown
1149.1
1817
Female, age 42, unknown
1106.8
1944
Female, age 72, unknown
998.5
1816
Male, age 51, unknown
938.0
2667
Female, age 75, unknown
835.7
1815
Male, age 53, unknown
767.1
2224
Female, age 72, unknown
738.0
2825
Male, age 18, unknown
651.2
2316
Male, age 76, right hemisphere
614.2
2273
Male, age 74, both hemispheres
550.5
2407
Male, age 75, both hemispheres
406.2
Red nucleus nTPM: 731.4
1821
Female, age 72, unknown
945.7
1954
Female, age 42, unknown
816.1
2588
Male, age 74, left hemisphere
805.1
2503
Female, age 72, unknown
795.6
2785
Male, age 18, unknown
789.9
2823
Male, age 76, right hemisphere
750.0
2227
Male, age 72, unknown
735.8
2769
Male, age 72, unknown
729.8
2725
Female, age 75, unknown
707.3
1865
Male, age 51, unknown
681.5
1904
Male, age 53, unknown
582.7
2584
Male, age 75, left hemisphere
437.7
Substantia nigra nTPM: 718.4
1941
Male, age 53, unknown
1129.3
1889
Female, age 72, unknown
952.2
2665
Male, age 74, both hemispheres
844.8
1916
Female, age 42, unknown
735.4
1851
Male, age 51, unknown
640.2
2241
Male, age 72, unknown
631.5
2590
Female, age 75, unknown
607.2
2583
Male, age 75, right hemisphere
563.4
2699
Male, age 18, unknown
557.8
2409
Female, age 72, unknown
522.2
Superior colliculus nTPM: 654.0
2087
Female, age 72, unknown
870.1
1895
Male, age 76, right hemisphere
792.5
1839
Male, age 51, unknown
723.8
2261
Male, age 18, unknown
711.2
1796
Male, age 53, unknown
686.1
2668
Female, age 75, unknown
646.4
2587
Male, age 74, left hemisphere
590.6
2664
Male, age 75, both hemispheres
568.3
1913
Female, age 42, unknown
494.7
1995
Male, age 72, unknown
456.8
Ventral tegmental area nTPM: 643.8
2410
Female, age 72, unknown
777.8
2218
Male, age 76, both hemispheres
694.0
1915
Female, age 42, unknown
646.6
1942
Male, age 51, unknown
621.0
2223
Female, age 72, unknown
606.6
2021
Male, age 53, unknown
517.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
807.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 807.0
Samples: 139
Max nTPM: 2158.3
Min nTPM: 191.6
Std nTPM: 332.5
Median nTPM: 749.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
2158.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1666.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1665.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1617.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1603.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
1582.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1501.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1431.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1431.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
1345.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
1302.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1293.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1281.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1255.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
1198.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
1186.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1181.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1178.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1154.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1141.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1131.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
1131.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1121.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
1110.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
1109.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
1105.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
1082.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1081.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
1079.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
1072.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
1031.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
996.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
987.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
985.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
957.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
957.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
950.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
935.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
920.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
908.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
882.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
877.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
876.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
871.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
870.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
865.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
860.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
859.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
858.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
854.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
852.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
842.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
841.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
836.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
829.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
821.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
821.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
820.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
810.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
809.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
799.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
797.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
793.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
779.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
771.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
761.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
758.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
752.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
751.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
749.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
747.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
738.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
738.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
736.3
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
732.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
729.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
728.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
721.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
714.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
710.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
706.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
701.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
698.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
694.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
688.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
688.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
682.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
679.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
678.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
677.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
677.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
672.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
661.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
653.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
649.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
646.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
640.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
633.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
627.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
623.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
609.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
602.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
599.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
599.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
596.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
594.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
593.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
588.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
571.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
569.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
565.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
558.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
547.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
547.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
543.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
536.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
528.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
518.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
494.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
494.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
472.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
471.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
451.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
450.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
436.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
431.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
425.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
396.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
384.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
363.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
319.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
306.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
300.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
295.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
266.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
263.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
251.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
241.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
191.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1315.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 1315.3
Samples: 4
Max nTPM: 1439.5
Min nTPM: 1226.2
Sample A
Male
1439.5
Sample B
Male
1245.8
Sample C
Female
1226.2
Sample D
Female
1349.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.