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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
104.6
nTPM
HPA Brain:
137.0
nTPM
GTEx:
104.6
nTPM
FANTOM5:
11.6
Scaled Tags Per Million
Pig:
162.1
nTPM
Mouse:
119.9
nTPM
Allen mouse:
5.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
137.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 96.9
2586
Male, age 75, left hemisphere
137.9
2219
Male, age 76, both hemispheres
129.2
2666
Male, age 74, left hemisphere
109.0
1827
Male, age 72, unknown
103.2
2019
Male, age 18, unknown
96.3
2828
Female, age 72, unknown
90.9
2411
Female, age 72, unknown
90.3
1833
Male, age 53, unknown
75.4
1870
Female, age 42, unknown
69.5
1830
Male, age 51, unknown
67.4
Dorsal raphe nucleus nTPM: 84.2
2298
Female, age 72, unknown
97.6
2750
Male, age 76, both hemispheres
92.0
2047
Male, age 72, unknown
86.4
1828
Male, age 53, unknown
84.6
2016
Female, age 72, unknown
60.3
Inferior colliculus nTPM: 84.1
2097
Female, age 72, unknown
100.4
1890
Male, age 53, unknown
85.4
1848
Female, age 42, unknown
79.4
2849
Male, age 72, unknown
71.1
Median raphe nucleus nTPM: 102.4
2220
Male, age 76, midline
102.4
Periaquaductal grey, anterior nTPM: 104.6
1795
Male, age 51, unknown
121.4
2502
Female, age 75, unknown
100.0
1947
Male, age 18, unknown
92.3
Periaquaductal grey, dorsal nTPM: 71.3
1840
Male, age 53, unknown
85.2
1831
Male, age 72, unknown
72.8
2464
Female, age 72, unknown
72.5
2850
Male, age 76, both hemispheres
54.9
Periaquaductal grey, lateral nTPM: 55.9
2053
Male, age 18, unknown
65.9
2140
Male, age 76, both hemispheres
57.6
2272
Male, age 74, both hemispheres
44.2
Pretectal area nTPM: 102.7
1816
Male, age 51, unknown
161.2
1944
Female, age 72, unknown
149.2
2007
Male, age 72, unknown
147.6
1817
Female, age 42, unknown
143.7
1815
Male, age 53, unknown
123.3
2667
Female, age 75, unknown
91.0
2224
Female, age 72, unknown
79.5
2825
Male, age 18, unknown
70.6
2407
Male, age 75, both hemispheres
66.3
2316
Male, age 76, right hemisphere
54.3
2273
Male, age 74, both hemispheres
43.1
Red nucleus nTPM: 71.8
2785
Male, age 18, unknown
100.0
2584
Male, age 75, left hemisphere
93.5
2503
Female, age 72, unknown
80.0
2588
Male, age 74, left hemisphere
76.4
1821
Female, age 72, unknown
74.2
2769
Male, age 72, unknown
72.7
2227
Male, age 72, unknown
72.2
1954
Female, age 42, unknown
69.8
1865
Male, age 51, unknown
63.3
1904
Male, age 53, unknown
63.3
2823
Male, age 76, right hemisphere
50.0
2725
Female, age 75, unknown
46.8
Substantia nigra nTPM: 137.0
2665
Male, age 74, both hemispheres
209.4
1916
Female, age 42, unknown
204.5
1851
Male, age 51, unknown
156.1
1941
Male, age 53, unknown
132.6
1889
Female, age 72, unknown
131.0
2409
Female, age 72, unknown
122.4
2241
Male, age 72, unknown
122.3
2583
Male, age 75, right hemisphere
110.3
2699
Male, age 18, unknown
102.6
2590
Female, age 75, unknown
79.0
Superior colliculus nTPM: 105.3
2668
Female, age 75, unknown
253.6
2087
Female, age 72, unknown
137.2
1796
Male, age 53, unknown
120.7
2261
Male, age 18, unknown
105.8
2664
Male, age 75, both hemispheres
91.6
1895
Male, age 76, right hemisphere
77.6
1913
Female, age 42, unknown
74.3
1839
Male, age 51, unknown
73.1
1995
Male, age 72, unknown
61.3
2587
Male, age 74, left hemisphere
57.4
Ventral tegmental area nTPM: 119.0
2410
Female, age 72, unknown
155.7
2218
Male, age 76, both hemispheres
154.4
1915
Female, age 42, unknown
124.1
2223
Female, age 72, unknown
106.1
1942
Male, age 51, unknown
98.0
2021
Male, age 53, unknown
75.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
104.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 104.6
Samples: 139
Max nTPM: 321.0
Min nTPM: 24.7
Std nTPM: 61.7
Median nTPM: 89.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
321.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
278.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
251.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
244.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
244.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
222.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
222.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
220.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
214.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
211.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
206.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
206.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
205.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
204.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
195.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
189.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
184.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
182.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
172.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
168.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
168.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
166.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
166.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
163.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
161.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
158.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
157.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
157.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
157.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
155.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
154.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
150.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
149.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
147.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
145.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
145.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
144.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
144.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
143.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
142.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
139.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
136.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
135.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
134.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
134.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
126.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
124.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
120.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
116.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
114.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
114.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
112.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
112.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
112.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
112.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
108.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
107.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
105.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
105.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
104.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
103.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
103.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
103.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
100.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
100.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
99.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
93.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
90.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
89.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
89.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
87.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
85.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
85.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
81.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
80.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
79.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
79.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
79.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
77.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
76.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
75.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
74.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
73.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
69.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
69.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
69.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
68.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
68.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
67.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
66.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
62.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
62.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
62.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
62.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
61.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
61.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
58.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
58.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
57.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
56.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
56.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
56.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
54.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
53.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
52.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
51.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
50.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
49.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
48.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
47.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
46.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
46.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
46.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
45.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
44.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
44.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
44.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
43.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
43.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
42.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
42.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
41.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
41.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
41.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
40.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
40.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
39.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
38.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
36.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
36.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
35.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
35.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
34.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
33.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
30.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
29.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
27.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
27.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
24.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
119.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 119.9
Samples: 4
Max nTPM: 132.1
Min nTPM: 111.7
Sample A
Male
132.1
Sample B
Male
116.8
Sample C
Female
111.7
Sample D
Female
119.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.