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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
85.3
nTPM
HPA Brain:
32.6
nTPM
GTEx:
85.3
nTPM
FANTOM5:
93.3
Scaled Tags Per Million
Pig:
17.4
nTPM
Mouse:
24.3
nTPM
Allen mouse:
0.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
32.6
Sample id
Sample description
nTPM
Amygdala nTPM: 30.7
2695
Female, age 67, right hemisphere
34.1
2814
Male, age 76, right hemisphere
32.9
2514
Male, age 75, right hemisphere
30.0
1987
Female, age 91, left hemisphere
28.6
2517
Female, age 94, left hemisphere
28.0
Basal amygdala nTPM: 28.9
2609
Male, age 75, right hemisphere
31.6
2685
Female, age 94, left hemisphere
31.1
2243
Female, age 91, right hemisphere
31.0
1955
Male, age 76, both hemispheres
30.6
2110
Male, age 80, left hemisphere
27.5
2827
Female, age 67, right hemisphere
21.4
Central amygdala nTPM: 32.6
2826
Female, age 94, left hemisphere
36.2
1905
Male, age 76, both hemispheres
35.2
2239
Male, age 80, left hemisphere
32.7
2701
Female, age 91, right hemisphere
30.3
2515
Male, age 75, right hemisphere
28.8
Corticomedial amygdala nTPM: 32.0
2242
Female, age 91, right hemisphere
38.4
2240
Male, age 76, both hemispheres
38.0
2829
Male, age 80, left hemisphere
35.4
2428
Male, age 75, right hemisphere
28.3
2429
Female, age 94, left hemisphere
28.1
2535
Female, age 67, right hemisphere
23.9
Lateral amygdala nTPM: 25.1
1883
Male, age 76, both hemispheres
31.6
2516
Male, age 75, right hemisphere
31.5
2534
Female, age 94, left hemisphere
25.8
2256
Male, age 80, left hemisphere
21.6
2830
Female, age 67, right hemisphere
20.1
2255
Female, age 91, right hemisphere
19.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 85.3
Samples: 152
Max nTPM: 245.3
Min nTPM: 52.4
Std nTPM: 26.0
Median nTPM: 79.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
245.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
189.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
179.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
174.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
155.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
151.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
148.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
125.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
125.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
121.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
118.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
115.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
115.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
108.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
108.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
108.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
108.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
105.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
103.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
103.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
103.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
102.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
102.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
102.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
102.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
102.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
101.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
101.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
99.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
95.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
94.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
93.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
93.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
92.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
92.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
90.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
90.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
90.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
90.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
90.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
88.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
88.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
88.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
88.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
87.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
87.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
87.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
87.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
87.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
87.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
86.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
86.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
86.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
86.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
86.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
85.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
85.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
85.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
84.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
83.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
83.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
83.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
83.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
82.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
82.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
82.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
82.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
82.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
81.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
81.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
80.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
80.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
80.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
80.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
80.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
80.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
79.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
78.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
78.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
78.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
78.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
77.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
77.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
77.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
77.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
77.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
76.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
76.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
75.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
74.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
74.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
74.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
74.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
74.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
74.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
74.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
74.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
74.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
73.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
73.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
73.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
73.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
73.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
72.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
72.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
72.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
72.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
72.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
72.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
72.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
72.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
71.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
71.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
71.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
71.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
70.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
70.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
70.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
69.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
69.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
69.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
68.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
68.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
68.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
67.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
67.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
67.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
66.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
66.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
66.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
65.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
65.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
64.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
64.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
64.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
63.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
63.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
62.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
61.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
61.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
60.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
60.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
60.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
59.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
58.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
57.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
57.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
55.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
55.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
53.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
52.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
24.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 24.3
Samples: 4
Max nTPM: 25.9
Min nTPM: 22.8
Sample A
Male
22.8
Sample B
Male
25.9
Sample C
Female
23.5
Sample D
Female
24.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.