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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
16.9
nTPM
HPA Brain:
68.3
nTPM
GTEx:
16.9
nTPM
FANTOM5:
96.5
Scaled Tags Per Million
Pig:
44.2
nTPM
Mouse:
84.1
nTPM
Allen mouse:
17.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.3
Sample id
Sample description
nTPM
Amygdala nTPM: 45.8
1987
Female, age 91, left hemisphere
61.0
2517
Female, age 94, left hemisphere
54.0
2514
Male, age 75, right hemisphere
41.3
2695
Female, age 67, right hemisphere
37.7
2814
Male, age 76, right hemisphere
35.1
Basal amygdala nTPM: 68.3
2685
Female, age 94, left hemisphere
84.6
2243
Female, age 91, right hemisphere
83.2
2827
Female, age 67, right hemisphere
67.3
2609
Male, age 75, right hemisphere
63.7
2110
Male, age 80, left hemisphere
62.1
1955
Male, age 76, both hemispheres
49.1
Central amygdala nTPM: 56.2
2239
Male, age 80, left hemisphere
66.2
2515
Male, age 75, right hemisphere
59.5
2701
Female, age 91, right hemisphere
59.0
2826
Female, age 94, left hemisphere
58.7
1905
Male, age 76, both hemispheres
37.6
Corticomedial amygdala nTPM: 67.7
2242
Female, age 91, right hemisphere
89.7
2535
Female, age 67, right hemisphere
85.2
2829
Male, age 80, left hemisphere
70.7
2429
Female, age 94, left hemisphere
57.8
2428
Male, age 75, right hemisphere
56.0
2240
Male, age 76, both hemispheres
46.7
Lateral amygdala nTPM: 54.8
2255
Female, age 91, right hemisphere
69.6
2256
Male, age 80, left hemisphere
63.6
2534
Female, age 94, left hemisphere
59.1
2830
Female, age 67, right hemisphere
48.2
2516
Male, age 75, right hemisphere
46.5
1883
Male, age 76, both hemispheres
41.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
16.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 16.9
Samples: 152
Max nTPM: 34.6
Min nTPM: 3.6
Std nTPM: 7.0
Median nTPM: 15.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
34.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
32.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
31.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
31.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
30.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
30.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
30.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
29.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
29.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
29.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
27.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
26.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
26.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
26.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
26.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
26.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
25.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
25.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
25.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
25.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
25.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
25.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
25.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
24.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
24.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
24.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
24.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
24.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
24.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
24.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
24.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
23.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
23.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
23.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
23.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
23.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
22.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
22.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
22.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
22.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
22.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
22.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
21.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
21.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
21.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
20.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
20.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
20.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
20.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
20.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
20.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
20.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
20.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
19.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
19.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
19.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
18.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
18.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
18.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
18.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
17.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
17.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
17.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
17.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
17.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
17.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
16.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
16.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
16.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
16.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
16.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
16.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
16.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
16.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
15.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
15.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
15.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
15.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
15.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
15.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
15.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
15.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
15.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
15.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
15.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
15.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
15.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
14.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
14.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
14.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
13.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
13.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
13.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
13.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
13.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
13.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
13.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
13.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
12.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
12.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
12.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
12.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
12.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
12.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
12.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
11.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
11.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
11.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
11.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
11.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
11.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
11.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
11.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
11.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
10.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
10.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
10.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
10.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
10.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
10.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
10.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
10.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
10.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
10.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
10.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
9.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
9.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
9.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
9.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
9.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
9.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
9.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
9.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
8.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
8.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
8.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
8.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
8.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
7.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
7.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
7.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
6.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
6.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
6.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
6.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
3.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
3.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
84.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 84.1
Samples: 4
Max nTPM: 98.6
Min nTPM: 76.6
Sample A
Male
76.6
Sample B
Male
78.9
Sample C
Female
98.6
Sample D
Female
82.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.