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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KDELR1 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
126.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
445.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
356.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
350.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
348.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
340.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
326.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
312.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
305.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
281.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
270.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
269.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
269.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
266.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
265.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
259.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
259.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
254.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
249.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
244.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
242.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
242.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
242.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
238.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
233.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
231.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
225.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
225.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
225.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
223.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
222.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
213.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
212.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
210.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
208.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
206.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
206.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
200.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
200.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
199.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
198.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
197.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
196.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
191.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
185.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
185.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
182.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
181.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
180.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
179.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
177.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
176.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
171.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
169.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
169.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
167.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
166.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
166.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
166.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
165.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
164.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
163.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
163.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
162.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
162.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
161.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
161.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
161.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
159.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
158.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
157.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
156.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
155.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
154.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
154.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
153.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
153.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
152.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
152.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
152.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
151.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
150.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
150.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
150.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
150.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
150.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
149.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
149.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
149.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
149.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
148.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
148.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
147.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
147.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
146.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
144.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
143.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
142.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
142.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
142.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
142.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
141.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
141.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
140.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
140.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
140.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
139.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
139.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
138.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
138.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
137.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
137.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
135.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
135.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
135.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
134.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
133.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
133.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
133.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
131.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
131.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
131.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
130.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
129.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
129.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
129.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
129.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
128.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
128.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
128.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
128.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
128.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
127.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
127.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
127.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
127.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
127.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
127.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
126.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
126.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
126.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
126.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
126.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
125.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
125.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
125.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
125.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
124.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
124.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
124.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
124.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
124.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
124.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
124.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
123.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
123.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
123.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
122.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
122.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
122.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
122.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
121.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
120.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
120.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
119.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
119.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
119.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
118.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
118.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
118.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
118.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
118.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
118.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
117.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
117.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
116.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
116.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
116.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
116.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
115.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
115.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
115.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
115.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
115.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
115.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
115.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
114.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
112.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
112.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
112.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
112.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
112.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
112.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
111.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
111.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
111.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
111.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
110.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
110.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
109.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
109.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
108.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
108.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
108.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
108.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
107.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
107.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
107.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
106.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
105.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
105.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
105.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
105.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
105.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
104.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
104.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
103.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
103.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
103.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
103.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
102.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
102.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
101.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
101.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
101.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
101.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
100.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
99.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
99.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
99.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
98.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
98.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
98.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
98.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
98.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
98.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
98.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
97.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
97.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
97.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
97.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
97.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
97.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
96.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
96.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
95.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
95.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
95.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
95.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
94.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
94.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
94.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
94.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
94.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
94.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
94.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
93.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
93.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
93.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
93.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
92.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
91.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
91.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
91.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
90.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
90.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
89.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
89.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
89.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
88.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
88.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
88.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
87.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
87.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
87.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
86.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
86.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
85.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
85.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
85.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
84.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
84.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
84.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
84.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
84.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
83.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
83.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
83.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
83.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
82.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
82.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
82.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
82.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
82.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
82.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
80.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
80.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
80.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
80.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
79.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
79.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
78.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
78.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
77.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
77.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
77.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
77.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
77.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
77.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
76.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
75.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
75.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
75.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
74.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
74.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
74.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
73.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
73.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
73.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
73.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
72.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
72.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
72.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
71.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
71.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
71.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
70.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
70.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
70.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
69.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
68.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
68.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
68.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
68.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
67.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
67.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
67.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
65.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
65.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
64.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
64.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
64.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
64.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
64.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
63.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
63.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
61.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
61.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
60.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
59.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
58.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
58.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
58.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
57.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
56.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
56.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
54.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
51.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
48.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
48.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
47.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
45.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KDELR1 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.1
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
448.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
361.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
236.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
226.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
211.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
207.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
203.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
193.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
191.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
181.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
175.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
164.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
160.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
156.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
154.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
152.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
151.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
151.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
150.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
150.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
147.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
147.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
145.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
145.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
140.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
139.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
138.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
138.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
137.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
136.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
136.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
134.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
129.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
129.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
127.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
126.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
125.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
124.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
122.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
122.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
122.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
122.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
121.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
121.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
120.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
120.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
120.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
119.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
118.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
115.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
114.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
113.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
112.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
111.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
110.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
107.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
107.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
106.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
105.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
105.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
104.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
104.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
103.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
103.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
103.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
99.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
99.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
98.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
98.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
98.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
97.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
96.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
96.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
96.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
94.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
94.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
94.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
94.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
93.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
93.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
93.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
93.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
92.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
92.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
92.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
90.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
90.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
90.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
90.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
89.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
89.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
89.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
89.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
89.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
89.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
89.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
88.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
88.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
88.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
88.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
88.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
87.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
87.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
86.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
86.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
86.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
86.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
86.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
86.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
86.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
85.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
85.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
85.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
85.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
84.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
84.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
84.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
83.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
83.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
82.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
82.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
81.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
81.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
81.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
81.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
80.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
78.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
77.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
77.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
77.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
77.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
76.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
75.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
75.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
75.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
74.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
74.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
74.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
74.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
72.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
72.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
72.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
72.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
72.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
72.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
72.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
72.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
71.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
70.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
70.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
70.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
70.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
70.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
69.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
69.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
69.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
69.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
69.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
69.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
68.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
66.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
66.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
66.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
66.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
66.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
66.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
66.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
66.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
66.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
65.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
64.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
64.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
64.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
64.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
63.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
63.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
63.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
63.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
63.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
62.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
62.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
62.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
61.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
61.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
61.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
61.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
60.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
60.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
60.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
60.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
59.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
59.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
59.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
58.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
58.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
58.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
58.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
58.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
58.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
57.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
57.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
57.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
57.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
57.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
57.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
56.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
55.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
55.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
55.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
55.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
54.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
54.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
53.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
53.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
53.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
53.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
50.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
49.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
48.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
48.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
47.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
47.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
44.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
43.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
43.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
42.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
41.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
40.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
38.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
36.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
35.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
0.8
285
Tumor
0.8
1025
Tumor
0.7
567
Tumor
0.7
433
Tumor
0.7
823
Tumor
0.7
283
Tumor
0.7
911
Tumor
0.7
421
Tumor
0.6
877
Tumor
0.6
445
Tumor
0.5
351
Tumor
0.4
745
Tumor
0.4
147
Tumor
0.4
951
Tumor
0.4
815
Tumor
0.4
817
Tumor
0.4
223
Tumor
0.4
473
Tumor
0.3
257
Tumor
0.3
863
Tumor
0.3
395
Tumor
0.3
557
Tumor
0.3
455
Tumor
0.3
311
Tumor
0.3
471
Tumor
0.2
967
Tumor
0.2
952
Normal
0.2
943
Tumor
0.2
851
Tumor
0.2
921
Tumor
0.2
975
Tumor
0.2
142
Normal
0.2
917
Tumor
0.2
435
Tumor
0.2
661
Tumor
0.2
755
Tumor
0.2
937
Tumor
0.2
963
Tumor
0.2
361
Tumor
0.2
461
Tumor
0.2
857
Tumor
0.2
965
Tumor
0.1
737
Tumor
0.1
456
Normal
0.1
983
Tumor
0.1
427
Tumor
0.1
914
Normal
0.1
385
Tumor
0.1
1041
Tumor
0.1
527
Tumor
0.1
713
Tumor
0.1
363
Tumor
0.1
191
Tumor
0.1
367
Tumor
0.1
525
Tumor
0.1
517
Tumor
0.1
231
Tumor
0.1
383
Tumor
0.1
545
Tumor
0.1
327
Tumor
0.1
131
Tumor
0.1
617
Tumor
0.1
424
Normal
0.1
697
Tumor
0.1
685
Tumor
0.1
573
Tumor
0.1
366
Normal
0.1
515
Tumor
0.1
211
Tumor
0.1
913
Tumor
0.1
217
Tumor
0.1
365
Tumor
0.0
451
Tumor
0.0
954
Normal
0.0
727
Tumor
0.0
968
Normal
0.0
341
Tumor
0.0
343
Tumor
0.0
145
Tumor
0.0
428
Normal
0.0
474
Normal
0.0
261
Tumor
0.0
463
Tumor
0.0
554
Normal
0.0
387
Tumor
0.0
977
Tumor
0.0
137
Tumor
0.0
213
Tumor
0.0
491
Tumor
0.0
1043
Tumor
0.0
391
Tumor
0.0
125
Tumor
0.0
232
Normal
0.0
813
Tumor
0.0
434
Normal
0.0
1045
Tumor
0.0
384
Normal
0.0
297
Tumor
-0.1
413
Tumor
-0.1
481
Tumor
-0.1
743
Tumor
-0.1
368
Normal
-0.1
861
Tumor
-0.1
436
Normal
-0.1
271
Tumor
-0.1
286
Normal
-0.1
187
Tumor
-0.1
665
Tumor
-0.1
464
Normal
-0.1
1027
Tumor
-0.1
816
Normal
-0.1
446
Normal
-0.1
477
Tumor
-0.1
375
Tumor
-0.1
472
Normal
-0.1
258
Normal
-0.1
355
Tumor
-0.1
1016
Normal
-0.1
362
Normal
-0.1
883
Tumor
-0.1
447
Tumor
-0.1
966
Normal
-0.1
422
Normal
-0.1
523
Tumor
-0.1
462
Normal
-0.1
352
Normal
-0.1
267
Tumor
-0.1
1015
Tumor
-0.1
342
Normal
-0.2
393
Tumor
-0.2
414
Normal
-0.2
497
Tumor
-0.2
484
Normal
-0.2
146
Normal
-0.2
498
Normal
-0.2
128
Normal
-0.2
262
Normal
-0.2
537
Tumor
-0.2
227
Tumor
-0.2
671
Tumor
-0.2
526
Normal
-0.2
228
Normal
-0.2
135
Tumor
-0.2
452
Normal
-0.2
956
Normal
-0.2
938
Normal
-0.2
212
Normal
-0.2
536
Normal
-0.2
392
Normal
-0.2
222
Normal
-0.2
715
Tumor
-0.2
344
Normal
-0.2
1021
Tumor
-0.2
868
Normal
-0.2
564
Normal
-0.2
647
Tumor
-0.2
132
Normal
-0.2
468
Normal
-0.2
492
Normal
-0.2
284
Normal
-0.2
912
Normal
-0.2
571
Tumor
-0.2
982
Normal
-0.2
354
Normal
-0.2
955
Tumor
-0.2
185
Tumor
-0.2
785
Tumor
-0.2
724
Normal
-0.2
111
Normal
-0.2
443
Tumor
-0.2
483
Tumor
-0.2
448
Normal
-0.2
272
Normal
-0.2
277
Tumor
-0.2
148
Normal
-0.2
538
Normal
-0.3
741
Tumor
-0.3
423
Tumor
-0.3
431
Tumor
-0.3
957
Tumor
-0.3
466
Normal
-0.3
221
Tumor
-0.3
358
Normal
-0.3
196
Normal
-0.3
298
Normal
-0.3
524
Normal
-0.3
814
Normal
-0.3
415
Tumor
-0.3
172
Normal
-0.3
553
Tumor
-0.3
432
Normal
-0.3
224
Normal
-0.3
574
Normal
-0.3
444
Normal
-0.3
1013
Tumor
-0.3
124
Normal
-0.3
494
Normal
-0.3
127
Tumor
-0.3
331
Tumor
-0.3
721
Tumor
-0.3
268
Normal
-0.3
648
Normal
-0.3
635
Tumor
-0.3
664
Normal
-0.3
1014
Normal
-0.3
162
Normal
-0.3
478
Normal
-0.3
278
Normal
-0.3
976
Normal
-0.3
376
Normal
-0.3
364
Normal
-0.3
426
Normal
-0.3
493
Tumor
-0.3
482
Normal
-0.3
312
Normal
-0.3
141
Tumor
-0.3
981
Tumor
-0.3
666
Normal
-0.3
357
Tumor
-0.3
533
Tumor
-0.3
192
Normal
-0.3
218
Normal
-0.3
113
Tumor
-0.3
518
Normal
-0.3
663
Tumor
-0.3
563
Tumor
-0.3
742
Normal
-0.3
964
Normal
-0.4
138
Normal
-0.4
728
Normal
-0.4
467
Tumor
-0.4
214
Normal
-0.4
488
Normal
-0.4
328
Normal
-0.4
1046
Normal
-0.4
627
Tumor
-0.4
546
Normal
-0.4
412
Normal
-0.4
416
Normal
-0.4
136
Normal
-0.4
394
Normal
-0.4
944
Normal
-0.4
978
Normal
-0.4
918
Normal
-0.4
516
Normal
-0.4
353
Tumor
-0.4
662
Normal
-0.4
984
Normal
-0.4
114
Normal
-0.4
386
Normal
-0.4
161
Tumor
-0.4
332
Normal
-0.4
698
Normal
-0.4
1028
Normal
-0.4
388
Normal
-0.4
881
Tumor
-0.4
852
Normal
-0.4
188
Normal
-0.4
1022
Normal
-0.4
186
Normal
-0.4
465
Tumor
-0.4
396
Normal
-0.4
558
Normal
-0.4
958
Normal
-0.5
528
Normal
-0.5
778
Normal
-0.5
744
Normal
-0.5
1026
Normal
-0.5
314
Normal
-0.5
313
Tumor
-0.5
746
Normal
-0.5
195
Tumor
-0.5
864
Normal
-0.5
535
Tumor
-0.5
112
Tumor
-0.5
568
Normal
-0.5
915
Tumor
-0.5
572
Normal
-0.5
696
Normal
-0.5
738
Normal
-0.5
926
Normal
-0.5
884
Normal
-0.5
487
Tumor
-0.5
878
Normal
-0.5
171
Tumor
-0.5
534
Normal
-0.5
858
Normal
-0.5
923
Tumor
-0.6
824
Normal
-0.6
615
Tumor
-0.6
874
Normal
-0.6
953
Tumor
-0.6
356
Normal
-0.6
777
Tumor
-0.6
1042
Normal
-0.6
695
Tumor
-0.6
882
Normal
-0.6
1032
Normal
-0.6
123
Tumor
-0.6
922
Normal
-0.6
866
Normal
-0.6
672
Normal
-0.6
916
Normal
-0.6
865
Tumor
-0.6
723
Tumor
-0.7
862
Normal
-0.7
786
Normal
-0.7
716
Normal
-0.7
925
Tumor
-0.7
924
Normal
-0.7
1044
Normal
-0.7
714
Normal
-0.7
513
Tumor
-0.7
641
Tumor
-0.7
1031
Tumor
-0.7
411
Tumor
-0.7
867
Tumor
-0.7
126
Normal
-0.7
686
Normal
-0.7
873
Tumor
-0.8
636
Normal
-0.8
514
Normal
-0.8
722
Normal
-0.8
642
Normal
-0.8
818
Normal
-0.8
616
Normal
-0.9
756
Normal
-1.0
628
Normal
-1.0
618
Normal
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.