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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
283.5
nTPM
GTEx:
283.5
nTPM
FANTOM5:
369.3
Scaled Tags Per Million
Pig:
740.4
nTPM
Mouse:
1239.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
283.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 283.5
Samples: 105
Max nTPM: 650.8
Min nTPM: 27.0
Std nTPM: 144.0
Median nTPM:
352_1
62 years, male
650.8
163_1
78 years, male
582.7
319_1
81 years, male
551.0
377_1
82 years, female
532.9
172_1
72 years, female
518.4
386_1
76 years, male
515.0
177_1
74 years, male
509.8
425_1
59 years, female
506.2
350_1
84 years, female
503.5
243_1
75 years, male
499.5
353_1
82 years, female
474.6
349_1
83 years, male
474.0
251_1
78 years, male
473.2
376_1
75 years, female
472.3
354_1
81 years, female
470.1
292_1
71 years, male
462.1
321_1
62 years, female
458.3
335_1
73 years, female
444.3
356_1
87 years, female
439.1
320_1
89 years, female
435.9
293_1
68 years, female
427.9
218_1
71 years, female
426.2
355_1
70 years, female
423.7
316_1
62 years, male
405.1
286_1
68 years, female
396.6
351_1
91 years, male
389.9
318_1
68 years, male
387.2
452_1
88 years, female
382.2
406_1
79 years, male
378.5
229_1
69 years, female
373.0
189_1
76 years, male
370.6
6_1
73 years, female
362.0
506_1
65 years, male
352.4
503_1
68 years, male
351.7
322_1
76 years, male
348.7
237_1
82 years, male
342.9
379_1
60 years, male
342.7
394_1
75 years, female
339.0
404_1
82 years, female
337.9
246_1
77 years, male
326.2
517_1
88 years, male
320.1
295_1
61 years, female
317.5
405_1
91 years, male
316.3
264_1
73 years, female
314.9
291_1
76 years, male
313.8
389_1
86 years, female
303.2
348_1
84 years, male
302.5
375_1
74 years, female
298.3
254_1
77 years, female
297.6
447_1
81 years, male
296.4
526_1
61 years, male
292.4
480_1
63 years, male
283.0
347_1
72 years, male
272.6
173_1
67 years, male
265.6
396_1
62 years, male
261.8
265_1
87 years, male
261.1
115_1
83 years, male
260.7
266_1
85 years, male
260.4
468_1
89 years, male
254.4
317_1
60 years, male
249.3
9_1
66 years, female
240.4
518_1
75 years, female
235.1
18_1
88 years, male
227.2
153_1
70 years, female
224.9
17_1
71 years, male
222.4
384_1
83 years, male
222.3
324_1
76 years, male
220.1
4_1
88 years, female
219.0
99_1
64 years, male
214.5
288_1
66 years, female
202.7
126_1
63 years, male
200.1
2_1
77 years, female
198.7
137_1
83 years, male
198.5
217_1
76 years, male
196.5
311_1
78 years, male
193.1
145_1
84 years, male
190.4
120_1
70 years, female
189.5
35_1
74 years, female
178.3
499_1
55 years, female
171.4
313_1
79 years, female
167.4
109_1
81 years, female
154.9
81_1
67 years, male
149.7
314_1
67 years, male
137.6
117_1
61 years, male
136.8
142_1
61 years, female
135.8
139_1
64 years, female
127.3
41_1
94 years, female
126.7
315_1
62 years, female
123.3
32_1
67 years, male
119.1
43_1
64 years, female
117.2
42_1
85 years, male
115.3
415_1
77 years, female
114.1
307_1
66 years, female
112.6
162_1
79 years, female
98.8
414_1
84 years, female
95.4
466_1
57 years, female
91.4
501_1
88 years, male
85.1
119_1
70 years, female
75.8
495_1
57 years, female
70.9
89_1
63 years, male
64.2
149_1
88 years, male
60.0
413_1
59 years, female
53.3
308_1
70 years, female
52.3
490_1
67 years, female
35.1
491_1
89 years, female
27.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.