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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
358.8
nTPM
GTEx:
358.8
nTPM
FANTOM5:
14.9
Scaled Tags Per Million
Pig:
167.1
nTPM
Mouse:
473.6
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
358.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 358.8
Samples: 105
Max nTPM: 662.3
Min nTPM: 86.7
Std nTPM: 121.2
Median nTPM:
218_1
71 years, female
662.3
321_1
62 years, female
626.5
319_1
81 years, male
569.6
452_1
88 years, female
565.0
352_1
62 years, male
533.2
377_1
82 years, female
528.0
349_1
83 years, male
512.4
163_1
78 years, male
507.5
354_1
81 years, female
501.6
356_1
87 years, female
501.0
355_1
70 years, female
496.8
384_1
83 years, male
496.5
353_1
82 years, female
495.5
320_1
89 years, female
495.1
6_1
73 years, female
494.9
386_1
76 years, male
492.1
351_1
91 years, male
489.7
376_1
75 years, female
488.1
394_1
75 years, female
478.8
379_1
60 years, male
465.3
447_1
81 years, male
463.8
177_1
74 years, male
462.8
389_1
86 years, female
457.4
243_1
75 years, male
457.0
4_1
88 years, female
456.6
506_1
65 years, male
446.9
2_1
77 years, female
440.6
17_1
71 years, male
438.6
172_1
72 years, female
437.5
295_1
61 years, female
436.3
335_1
73 years, female
427.7
406_1
79 years, male
425.8
237_1
82 years, male
422.4
317_1
60 years, male
421.6
99_1
64 years, male
416.3
318_1
68 years, male
414.8
503_1
68 years, male
414.4
350_1
84 years, female
413.6
173_1
67 years, male
408.7
347_1
72 years, male
407.6
375_1
74 years, female
406.8
145_1
84 years, male
404.9
246_1
77 years, male
404.5
322_1
76 years, male
403.6
137_1
83 years, male
399.6
293_1
68 years, female
399.2
189_1
76 years, male
398.5
120_1
70 years, female
393.4
316_1
62 years, male
390.7
153_1
70 years, female
389.2
526_1
61 years, male
384.9
396_1
62 years, male
379.2
286_1
68 years, female
377.4
404_1
82 years, female
376.3
480_1
63 years, male
371.5
115_1
83 years, male
369.0
405_1
91 years, male
355.8
35_1
74 years, female
353.9
264_1
73 years, female
345.9
517_1
88 years, male
344.2
251_1
78 years, male
343.9
265_1
87 years, male
335.6
291_1
76 years, male
334.9
217_1
76 years, male
334.1
425_1
59 years, female
329.0
18_1
88 years, male
328.7
348_1
84 years, male
326.5
254_1
77 years, female
319.6
292_1
71 years, male
316.2
126_1
63 years, male
315.0
229_1
69 years, female
305.8
307_1
66 years, female
304.1
9_1
66 years, female
291.2
518_1
75 years, female
287.0
468_1
89 years, male
286.6
311_1
78 years, male
285.8
119_1
70 years, female
281.4
41_1
94 years, female
280.7
109_1
81 years, female
278.2
266_1
85 years, male
267.0
499_1
55 years, female
266.1
42_1
85 years, male
265.1
315_1
62 years, female
252.8
308_1
70 years, female
249.2
117_1
61 years, male
248.0
314_1
67 years, male
246.2
139_1
64 years, female
242.2
324_1
76 years, male
238.4
142_1
61 years, female
237.4
313_1
79 years, female
221.2
288_1
66 years, female
216.0
162_1
79 years, female
213.8
81_1
67 years, male
205.7
89_1
63 years, male
203.1
415_1
77 years, female
181.5
32_1
67 years, male
173.2
501_1
88 years, male
170.1
495_1
57 years, female
167.8
414_1
84 years, female
145.7
466_1
57 years, female
137.8
43_1
64 years, female
137.4
149_1
88 years, male
103.8
413_1
59 years, female
96.6
491_1
89 years, female
95.2
490_1
67 years, female
86.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.