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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1087.7
nTPM
HPA Brain:
428.5
nTPM
GTEx:
1087.7
nTPM
FANTOM5:
13.6
Scaled Tags Per Million
Pig:
586.1
nTPM
Mouse:
446.5
nTPM
Allen mouse:
6.6
Expression energy
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
428.5
Sample id
Sample description
nTPM
Hippocampus nTPM: 428.5
1898
Male, age 80, left hemisphere
497.2
2529
Female, age 94, left hemisphere
481.6
2621
Female, age 67, right hemisphere
415.5
2148
Female, age 91, left hemisphere
393.8
1911
Female, age 85, right hemisphere
392.9
1855
Male, age 76, left hemisphere
390.1
Dentate gyrus nTPM: 407.1
2010
Male, age 76, both hemispheres
482.2
2530
Female, age 94, left hemisphere
481.1
2531
Female, age 67, both hemispheres
423.4
2246
Female, age 85, both hemispheres
355.2
1927
Female, age 91, both hemispheres
352.4
2528
Male, age 74, both hemispheres
348.5
Entorhinal gyrus nTPM: 409.4
2686
Male, age 75, right hemisphere
497.1
2117
Female, age 91, right hemisphere
471.0
1787
Male, age 76, left hemisphere
417.3
2764
Male, age 80, right hemisphere
372.0
1938
Female, age 85, left hemisphere
371.5
2613
Female, age 94, left hemisphere
327.6
Hippocampus, CA1 nTPM: 378.3
2082
Female, age 91, right hemisphere
445.2
2045
Male, age 76, both hemispheres
428.2
1873
Female, age 85, both hemispheres
352.2
2527
Male, age 74, both hemispheres
349.1
2749
Male, age 80, left hemisphere
316.6
Hippocampus, CA2 nTPM: 388.4
1963
Male, age 80, left hemisphere
432.9
2113
Female, age 91, right hemisphere
419.9
2437
Female, age 94, left hemisphere
406.2
1940
Female, age 85, left hemisphere
383.1
1892
Male, age 76, both hemispheres
371.6
2249
Male, age 74, both hemispheres
317.0
Hippocampus, CA3 nTPM: 370.9
2861
Female, age 67, both hemispheres
454.2
1867
Male, age 76, both hemispheres
431.1
1891
Female, age 85, both hemispheres
382.2
2436
Male, age 74, both hemispheres
332.1
2620
Female, age 94, left hemisphere
328.3
2137
Male, age 80, left hemisphere
297.2
Parahippocampal cortex nTPM: 357.9
2018
Male, age 76, both hemispheres
562.1
2250
Female, age 67, right hemisphere
364.6
1933
Female, age 85, both hemispheres
360.6
1990
Female, age 91, right hemisphere
345.8
2692
Male, age 74, both hemispheres
341.5
2532
Female, age 72, left hemisphere
341.3
2622
Female, age 67, right hemisphere
340.6
2245
Female, age 91, both hemispheres
340.2
1850
Male, age 80, both hemispheres
317.6
2693
Female, age 94, both hemispheres
264.6
Perirhinal gyrus nTPM: 337.4
1841
Female, age 85, right hemisphere
361.7
1847
Female, age 91, left hemisphere
361.2
1794
Male, age 80, right hemisphere
336.5
2521
Female, age 94, right hemisphere
321.0
2848
Male, age 76, right hemisphere
306.7
Subiculum nTPM: 400.8
2042
Male, age 76, both hemispheres
567.6
2729
Female, age 91, right hemisphere
416.0
1977
Female, age 85, both hemispheres
380.1
1901
Male, age 80, both hemispheres
372.5
2619
Male, age 74, both hemispheres
357.9
2438
Female, age 94, left hemisphere
310.3
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1087.7
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 1087.7
Samples: 197
Max nTPM: 2802.1
Min nTPM: 411.9
Std nTPM: 440.7
Median nTPM: 972.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
2802.1
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
2759.5
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
2649.8
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
2374.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
2313.4
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
2231.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
2211.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
2207.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
2025.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
2001.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
1946.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1790.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1777.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1767.5
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
1765.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
1738.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1735.6
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1713.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1709.6
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
1705.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1692.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1624.9
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
1623.9
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
1614.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
1582.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
1555.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
1550.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1545.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1531.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1500.9
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1468.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
1460.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
1452.2
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1443.1
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
1428.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1413.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
1408.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
1407.4
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
1393.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1389.6
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
1377.1
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
1374.3
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
1365.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
1340.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
1337.0
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1325.4
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
1323.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
1300.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
1296.5
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
1295.1
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
1293.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
1289.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1283.4
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
1280.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
1272.0
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
1263.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1239.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
1226.2
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
1213.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
1209.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1201.5
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
1197.3
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
1195.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1184.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
1165.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
1165.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
1150.6
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
1147.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1142.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
1138.8
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
1132.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
1124.1
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
1121.8
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
1118.2
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
1113.0
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
1093.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
1082.8
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
1081.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
1077.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
1074.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1071.3
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
1063.6
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
1061.1
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
1048.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1045.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
1035.8
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
1035.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
1028.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
1024.8
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
1017.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
1016.3
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
1012.2
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
1003.9
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
993.5
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
992.9
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
989.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
984.8
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
974.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
972.6
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
971.4
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
969.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
959.3
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
959.3
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
958.8
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
957.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
955.8
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
953.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
953.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
947.4
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
942.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
937.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
937.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
931.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
921.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
918.9
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
916.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
907.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
906.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
903.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
899.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
897.2
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
895.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
892.1
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
888.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
887.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
887.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
868.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
862.8
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
856.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
855.1
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
847.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
841.8
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
839.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
837.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
827.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
823.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
821.6
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
817.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
815.9
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
812.3
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
808.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
806.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
802.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
801.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
799.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
797.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
795.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
776.0
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
772.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
755.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
750.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
745.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
743.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
740.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
739.3
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
737.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
733.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
732.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
730.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
729.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
727.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
726.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
718.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
710.4
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
704.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
702.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
686.7
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
684.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
680.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
679.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
672.4
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
670.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
662.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
653.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
650.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
636.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
633.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
626.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
616.6
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
615.1
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
612.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
612.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
605.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
603.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
597.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
596.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
587.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
581.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
577.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
569.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
560.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
553.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
545.2
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
524.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
472.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
420.1
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
411.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
446.5
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 424.2
Samples: 4
Max nTPM: 455.3
Min nTPM: 394.8
Sample A
Male
424.2
Sample B
Male
422.4
Sample C
Female
455.3
Sample D
Female
394.8
Hippocampal formation nTPM: 446.6
Samples: 4
Max nTPM: 509.1
Min nTPM: 409.5
Sample A
Male
509.1
Sample B
Male
409.5
Sample C
Female
418.1
Sample D
Female
449.6
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.