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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1417.3
nTPM
HPA Brain:
568.9
nTPM
GTEx:
1417.3
nTPM
FANTOM5:
19.4
Scaled Tags Per Million
Pig:
499.5
nTPM
Mouse:
515.0
nTPM
Allen mouse:
5.9
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
568.9
Sample id
Sample description
nTPM
Amygdala nTPM: 532.5
2695
Female, age 67, right hemisphere
661.3
2514
Male, age 75, right hemisphere
559.1
2517
Female, age 94, left hemisphere
532.8
1987
Female, age 91, left hemisphere
484.2
2814
Male, age 76, right hemisphere
425.2
Basal amygdala nTPM: 501.4
2827
Female, age 67, right hemisphere
737.9
2609
Male, age 75, right hemisphere
572.1
2110
Male, age 80, left hemisphere
472.2
2685
Female, age 94, left hemisphere
453.8
2243
Female, age 91, right hemisphere
389.5
1955
Male, age 76, both hemispheres
382.7
Central amygdala nTPM: 541.1
2826
Female, age 94, left hemisphere
924.5
2515
Male, age 75, right hemisphere
620.6
2239
Male, age 80, left hemisphere
417.4
1905
Male, age 76, both hemispheres
391.3
2701
Female, age 91, right hemisphere
351.7
Corticomedial amygdala nTPM: 453.3
2428
Male, age 75, right hemisphere
624.7
2535
Female, age 67, right hemisphere
550.0
2829
Male, age 80, left hemisphere
445.8
2242
Female, age 91, right hemisphere
401.2
2429
Female, age 94, left hemisphere
373.2
2240
Male, age 76, both hemispheres
324.9
Lateral amygdala nTPM: 568.9
2830
Female, age 67, right hemisphere
882.0
2534
Female, age 94, left hemisphere
625.9
2516
Male, age 75, right hemisphere
608.6
2256
Male, age 80, left hemisphere
499.5
2255
Female, age 91, right hemisphere
420.8
1883
Male, age 76, both hemispheres
376.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1417.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1417.3
Samples: 152
Max nTPM: 4150.2
Min nTPM: 510.4
Std nTPM: 628.1
Median nTPM: 1283.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
4150.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
3489.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
3319.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
3250.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
3242.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
3084.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
3023.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2972.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2497.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
2448.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
2346.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
2344.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
2326.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
2314.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
2268.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
2257.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
2256.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
2227.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
2182.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
2117.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
2023.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
2007.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1996.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1961.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1881.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1830.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1819.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
1810.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1805.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
1766.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1722.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1712.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1709.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1686.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1676.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1676.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
1655.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1635.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
1631.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
1630.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
1598.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1587.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1576.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1573.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1565.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
1551.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1541.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1531.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1519.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1514.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
1508.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1505.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
1435.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1430.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1414.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
1412.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
1395.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1395.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1393.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1383.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1367.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
1367.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1365.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1358.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1357.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
1346.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1327.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
1326.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
1324.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
1319.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1319.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1317.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
1290.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1288.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
1288.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1287.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1279.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1272.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
1268.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
1267.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
1245.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
1245.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1218.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1216.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1210.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1205.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1193.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
1189.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
1181.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1175.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1173.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1167.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1159.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1155.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
1154.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
1150.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
1149.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1148.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
1140.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1133.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
1131.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
1122.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1119.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
1105.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
1096.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
1084.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1080.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
1050.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
1038.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
1033.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
1026.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
1026.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
1006.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
1005.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
1001.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
987.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
981.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
966.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
962.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
955.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
949.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
947.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
928.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
894.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
883.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
881.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
870.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
868.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
855.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
849.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
843.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
834.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
827.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
819.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
818.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
815.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
803.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
778.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
772.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
771.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
758.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
750.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
746.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
726.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
709.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
691.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
686.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
659.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
632.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
631.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
579.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
510.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
515.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 515.0
Samples: 4
Max nTPM: 557.2
Min nTPM: 470.3
Sample A
Male
470.3
Sample B
Male
557.2
Sample C
Female
544.0
Sample D
Female
488.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.