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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
81.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
179.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
166.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
159.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
152.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
147.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
127.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
125.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
121.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
121.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
118.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
103.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
102.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
101.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
101.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
100.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
98.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
96.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
94.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
93.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
92.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
89.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
89.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
87.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
86.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
83.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
82.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
81.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
79.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
79.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
76.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
75.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
75.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
73.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
73.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
73.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
73.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
73.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
72.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
70.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
69.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
68.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
67.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
67.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
66.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
66.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
65.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
65.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
64.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
63.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
62.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
60.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
60.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
57.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
56.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
53.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
50.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
48.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
46.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
41.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
39.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
34.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD5 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
304.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
285.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
284.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
284.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
250.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
247.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
222.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
214.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
213.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
211.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
210.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
206.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
196.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
188.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
184.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
184.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
183.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
181.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
178.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
178.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
173.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
173.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
170.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
167.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
167.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
167.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
163.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
161.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
160.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
160.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
158.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
156.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
155.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
155.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
152.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
152.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
150.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
149.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
148.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
147.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
146.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
145.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
144.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
143.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
143.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
142.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
140.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
139.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
139.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
138.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
137.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
137.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
135.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
134.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
134.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
134.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
133.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
133.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
132.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
132.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
131.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
131.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
131.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
130.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
130.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
130.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
130.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
130.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
130.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
130.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
129.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
129.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
129.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
129.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
128.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
128.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
128.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
127.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
127.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
127.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
127.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
127.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
127.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
126.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
126.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
126.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
125.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
125.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
125.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
125.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
125.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
125.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
125.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
124.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
124.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
124.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
124.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
123.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
123.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
123.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
123.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
123.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
123.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
122.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
122.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
121.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
121.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
121.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
121.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
121.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
121.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
120.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
120.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
120.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
120.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
119.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
119.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
119.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
119.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
119.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
119.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
119.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
119.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
118.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
118.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
118.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
118.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
117.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
117.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
117.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
117.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
117.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
117.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
116.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
116.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
115.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
115.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
115.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
115.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
115.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
115.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
114.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
114.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
114.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
114.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
114.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
114.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
113.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
113.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
113.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
112.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
112.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
112.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
112.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
112.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
112.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
112.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
111.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
111.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
110.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
109.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
109.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
108.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
108.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
107.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
107.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
107.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
107.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
107.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
107.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
107.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
107.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
107.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
107.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
106.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
106.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
106.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
106.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
106.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
106.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
106.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
106.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
106.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
105.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
105.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
105.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
105.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
104.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
104.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
104.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
104.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
104.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
103.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
103.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
103.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
103.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
103.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
103.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
103.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
103.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
103.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
102.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
102.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
102.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
102.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
102.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
102.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
102.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
102.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
102.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
102.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
102.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
102.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
102.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
101.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
101.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
101.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
101.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
101.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
101.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
100.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
100.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
100.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
100.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
100.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
100.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
100.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
99.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
99.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
99.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
99.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
99.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
99.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
99.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
99.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
98.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
98.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
98.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
98.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
98.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
98.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
98.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
98.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
97.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
97.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
97.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
97.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
97.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
97.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
97.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
97.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
97.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
97.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
97.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
96.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
96.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
96.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
96.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
96.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
96.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
96.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
96.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
96.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
96.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
95.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
95.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
95.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
95.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
95.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
95.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
95.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
95.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
95.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
94.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
94.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
94.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
94.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
94.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
94.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
94.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
94.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
93.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
93.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
93.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
93.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
93.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
93.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
93.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
93.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
93.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
93.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
93.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
93.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
92.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
92.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
92.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
92.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
92.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
92.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
92.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
92.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
92.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
92.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
91.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
91.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
91.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
91.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
91.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
90.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
90.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
90.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
90.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
90.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
90.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
90.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
90.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
90.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
90.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
89.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
89.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
89.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
89.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
89.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
89.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
89.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
89.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
89.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
88.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
88.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
88.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
88.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
88.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
88.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
87.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
87.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
87.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
87.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
87.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
87.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
87.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
87.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
87.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
86.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
86.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
86.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
86.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
86.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
86.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
86.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
86.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
86.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
86.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
86.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
85.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
85.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
85.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
85.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
85.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
85.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
85.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
84.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
84.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
84.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
84.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
84.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
83.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
83.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
83.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
83.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
83.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
83.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
83.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
83.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
83.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
83.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
83.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
82.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
82.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
82.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
82.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
82.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
82.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
82.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
82.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
81.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
81.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
81.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
81.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
81.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
81.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
81.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
80.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
80.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
80.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
80.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
80.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
80.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
80.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
79.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
79.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
79.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
79.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
79.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
79.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
79.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
79.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
79.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
79.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
79.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
78.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
78.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
78.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
77.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
77.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
77.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
76.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
76.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
76.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
76.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
76.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
76.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
76.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
76.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
76.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
75.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
75.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
75.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
75.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
75.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
75.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
75.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
74.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
74.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
74.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
74.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
73.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
73.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
73.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
73.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
73.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
73.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
72.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
72.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
72.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
72.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
72.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
72.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
72.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
72.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
72.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
72.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
72.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
71.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
71.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
71.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
71.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
71.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
71.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
71.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
70.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
70.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
70.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
70.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
70.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
70.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
70.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
69.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
69.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
69.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
69.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
69.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
69.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
69.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
69.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
69.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
68.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
67.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
67.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
66.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
66.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
66.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
65.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
65.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
64.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
64.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
64.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
64.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
64.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
63.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
63.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
63.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
62.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
62.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
62.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
62.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
61.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
61.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
60.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
60.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
60.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
60.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
57.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
57.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
56.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
55.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
54.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
53.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
53.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
52.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
51.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
48.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
48.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
46.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
46.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
45.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
45.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
37.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
36.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
32.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD5 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
119.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
690.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
244.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
229.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
220.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
215.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
166.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
164.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
160.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
155.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
154.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
154.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
153.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
153.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
153.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
153.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
151.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
148.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
144.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
138.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
138.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
137.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
135.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
133.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
133.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
133.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
132.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
132.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
131.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
129.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
129.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
126.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
125.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
124.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
123.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
121.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
118.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
118.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
117.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
116.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
114.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
113.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
109.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
108.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
108.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
108.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
108.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
106.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
106.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
106.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
106.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
106.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
106.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
105.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
103.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
103.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
102.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
102.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
102.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
101.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
101.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
100.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
100.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
100.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
99.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
99.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
98.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
96.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
94.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
93.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
91.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
91.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
90.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
90.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
90.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
89.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
88.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
88.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
87.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
86.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
84.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
84.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
84.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
84.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
82.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
82.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
81.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
77.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
76.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
76.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
76.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
74.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
74.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
74.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
71.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
71.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
69.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
67.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
67.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
66.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD5 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
246.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
205.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
190.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
183.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
181.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
176.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
172.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
169.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
140.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
139.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
138.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
138.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
134.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
133.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
131.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
122.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
120.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
120.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
117.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
117.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
116.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
116.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
115.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
114.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
113.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
111.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
111.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
110.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
109.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
106.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
106.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
106.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
106.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
103.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
103.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
103.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
103.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
102.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
102.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
101.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
101.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
100.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
100.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
100.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
99.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
98.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
98.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
97.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
97.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
96.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
96.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
96.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
95.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
95.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
95.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
94.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
94.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
94.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
93.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
93.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
92.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
92.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
91.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
91.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
91.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
91.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
91.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
90.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
90.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
90.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
90.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
89.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
89.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
89.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
89.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
88.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
88.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
87.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
86.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
86.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
86.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
85.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
85.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
85.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
85.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
84.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
84.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
84.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
84.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
83.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
83.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
83.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
82.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
82.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
82.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
82.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
82.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
81.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
81.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
81.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
80.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
80.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
80.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
79.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
79.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
79.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
78.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
78.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
78.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
78.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
78.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
78.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
77.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
77.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
76.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
76.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
76.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
75.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
75.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
75.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
75.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
75.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
74.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
74.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
73.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
73.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
73.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
73.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
73.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
73.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
73.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
73.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
73.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
73.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
72.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
72.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
72.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
72.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
71.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
71.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
71.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
71.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
71.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
71.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
71.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
70.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
70.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
70.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
70.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
70.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
69.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
69.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
69.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
69.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
68.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
68.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
68.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
68.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
68.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
67.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
67.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
67.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
67.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
67.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
67.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
66.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
66.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
66.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
65.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
65.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
64.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
64.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
64.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
64.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
63.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
62.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
62.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
61.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
61.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
61.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
61.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
61.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
60.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
60.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
60.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
59.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
59.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
59.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
59.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
59.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
58.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
58.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
58.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
58.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
58.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
58.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
57.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
56.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
56.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
55.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
55.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
55.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
54.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
54.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
54.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
53.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
53.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
53.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
52.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
52.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
52.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
51.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
51.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
51.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
50.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
50.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
50.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
50.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
49.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
49.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
48.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
47.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
47.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
47.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
46.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
45.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
44.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
44.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
44.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
43.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
43.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
42.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
40.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
40.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
40.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
40.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
38.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
37.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
35.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
34.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
34.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
34.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
33.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
33.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
32.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
31.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
29.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
27.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
25.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
16.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
13.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
13.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025050003
Tumor
1.1
CPT0021240003
Tumor
1.0
CPT0009000003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0024670003
Tumor
0.8
CPT0025880003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0065930003
Tumor
0.7
CPT0001540009
Tumor
0.7
CPT0012900004
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0065430003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0012080003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0011240003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0025230003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0092790003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0079230003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0078530001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0020120003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0079510001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0065870003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0064400001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0088570001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0078800003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0000890001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0012180003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0063330001
Normal
-0.5
CPT0023360001
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0001510001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0017850003
Tumor
-0.5
CPT0092310003
Normal
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
