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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
109.8
nTPM
HPA Brain:
120.7
nTPM
GTEx:
109.8
nTPM
FANTOM5:
127.3
Scaled Tags Per Million
Pig:
110.2
nTPM
Mouse:
141.2
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
120.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 85.0
2411
Female, age 72, unknown
109.6
2019
Male, age 18, unknown
107.1
2219
Male, age 76, both hemispheres
98.7
1827
Male, age 72, unknown
96.5
1870
Female, age 42, unknown
87.4
1833
Male, age 53, unknown
86.1
1830
Male, age 51, unknown
75.6
2828
Female, age 72, unknown
75.5
2666
Male, age 74, left hemisphere
58.1
2586
Male, age 75, left hemisphere
55.7
Dorsal raphe nucleus nTPM: 107.6
2298
Female, age 72, unknown
138.8
2750
Male, age 76, both hemispheres
108.7
1828
Male, age 53, unknown
107.0
2047
Male, age 72, unknown
102.5
2016
Female, age 72, unknown
80.8
Inferior colliculus nTPM: 92.9
2097
Female, age 72, unknown
124.5
1848
Female, age 42, unknown
85.3
1890
Male, age 53, unknown
85.0
2849
Male, age 72, unknown
77.0
Median raphe nucleus nTPM: 120.7
2220
Male, age 76, midline
120.7
Periaquaductal grey, anterior nTPM: 106.9
2502
Female, age 75, unknown
115.6
1795
Male, age 51, unknown
106.9
1947
Male, age 18, unknown
98.2
Periaquaductal grey, dorsal nTPM: 88.4
2850
Male, age 76, both hemispheres
99.0
1840
Male, age 53, unknown
87.2
1831
Male, age 72, unknown
86.5
2464
Female, age 72, unknown
81.1
Periaquaductal grey, lateral nTPM: 98.2
2272
Male, age 74, both hemispheres
125.6
2053
Male, age 18, unknown
85.3
2140
Male, age 76, both hemispheres
83.8
Pretectal area nTPM: 109.8
1944
Female, age 72, unknown
131.4
2273
Male, age 74, both hemispheres
128.6
2007
Male, age 72, unknown
127.1
1816
Male, age 51, unknown
126.2
1817
Female, age 42, unknown
126.0
2224
Female, age 72, unknown
124.3
1815
Male, age 53, unknown
110.8
2667
Female, age 75, unknown
100.7
2825
Male, age 18, unknown
84.5
2316
Male, age 76, right hemisphere
74.8
2407
Male, age 75, both hemispheres
73.3
Red nucleus nTPM: 84.7
1821
Female, age 72, unknown
114.0
2725
Female, age 75, unknown
100.6
2785
Male, age 18, unknown
98.3
2503
Female, age 72, unknown
90.9
1954
Female, age 42, unknown
84.8
2823
Male, age 76, right hemisphere
81.6
1865
Male, age 51, unknown
81.3
2227
Male, age 72, unknown
79.6
1904
Male, age 53, unknown
77.9
2769
Male, age 72, unknown
76.3
2588
Male, age 74, left hemisphere
69.5
2584
Male, age 75, left hemisphere
61.5
Substantia nigra nTPM: 107.4
1916
Female, age 42, unknown
139.4
2241
Male, age 72, unknown
133.9
1941
Male, age 53, unknown
125.9
1851
Male, age 51, unknown
121.4
1889
Female, age 72, unknown
117.0
2665
Male, age 74, both hemispheres
98.6
2699
Male, age 18, unknown
93.5
2409
Female, age 72, unknown
93.1
2590
Female, age 75, unknown
83.3
2583
Male, age 75, right hemisphere
68.4
Superior colliculus nTPM: 89.8
2087
Female, age 72, unknown
110.0
2587
Male, age 74, left hemisphere
108.4
2261
Male, age 18, unknown
102.2
1796
Male, age 53, unknown
95.9
1895
Male, age 76, right hemisphere
93.8
2668
Female, age 75, unknown
91.2
1839
Male, age 51, unknown
84.6
1913
Female, age 42, unknown
81.3
1995
Male, age 72, unknown
72.5
2664
Male, age 75, both hemispheres
58.0
Ventral tegmental area nTPM: 107.3
2218
Male, age 76, both hemispheres
132.3
2410
Female, age 72, unknown
125.8
1915
Female, age 42, unknown
112.5
2223
Female, age 72, unknown
93.4
1942
Male, age 51, unknown
91.8
2021
Male, age 53, unknown
87.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
109.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 109.8
Samples: 139
Max nTPM: 262.8
Min nTPM: 57.8
Std nTPM: 34.1
Median nTPM: 102.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
262.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
247.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
215.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
213.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
208.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
187.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
184.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
177.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
161.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
156.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
153.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
149.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
147.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
147.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
147.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
146.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
146.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
143.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
143.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
142.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
137.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
137.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
136.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
133.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
133.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
132.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
130.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
130.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
128.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
125.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
124.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
124.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
124.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
122.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
122.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
121.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
120.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
119.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
119.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
117.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
116.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
115.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
115.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
114.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
114.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
113.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
113.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
112.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
111.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
111.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
111.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
111.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
111.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
110.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
110.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
109.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
108.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
107.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
107.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
107.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
107.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
105.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
105.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
104.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
104.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
104.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
103.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
103.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
102.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
102.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
102.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
102.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
101.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
101.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
100.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
100.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
99.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
99.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
98.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
97.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
97.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
97.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
97.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
96.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
96.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
96.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
95.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
95.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
94.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
94.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
94.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
92.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
92.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
91.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
91.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
90.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
90.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
90.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
90.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
90.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
90.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
90.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
89.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
89.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
88.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
88.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
87.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
85.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
85.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
85.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
84.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
84.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
83.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
83.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
83.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
82.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
81.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
81.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
81.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
80.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
79.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
79.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
79.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
79.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
79.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
78.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
78.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
77.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
76.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
75.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
69.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
68.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
68.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
66.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
66.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
65.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
63.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
62.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
57.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
141.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 141.3
Samples: 4
Max nTPM: 146.3
Min nTPM: 138.3
Sample A
Male
138.3
Sample B
Male
146.3
Sample C
Female
138.7
Sample D
Female
141.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.