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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
192.2
nTPM
FANTOM5:
228.9
Scaled Tags Per Million
Pig:
55.7
nTPM
Allen mouse:
4.4
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
192.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 192.2
2301
Female, age 85, both hemispheres
272.1
2188
Female, age 91, both hemispheres
220.1
2090
Male, age 80, both hemispheres
183.4
1984
Male, age 76, both hemispheres
93.3
Dorsal cochlear nucleus nTPM: 136.1
2187
Female, age 91, both hemispheres
182.7
2378
Male, age 80, both hemispheres
143.2
2802
Male, age 74, right hemisphere
142.1
2370
Male, age 61, both hemispheres
118.7
2058
Male, age 76, both hemispheres
93.9
Dorsal tegmental nucleus nTPM: 114.5
2083
Male, age 80, both hemispheres
158.8
2326
Male, age 74, both hemispheres
125.4
1936
Male, age 76, left hemisphere
97.5
2358
Male, age 61, both hemispheres
76.3
Dorsolateral tegmental area nTPM: 122.9
2751
Female, age 85, both hemispheres
189.4
2337
Male, age 61, both hemispheres
136.1
2654
Male, age 80, both hemispheres
136.1
2360
Male, age 74, both hemispheres
78.8
2141
Male, age 76, both hemispheres
73.9
Kolliker-Fuse nucleus nTPM: 143.4
2793
Female, age 91, left hemisphere
223.0
2163
Male, age 80, both hemispheres
128.3
2315
Male, age 76, right hemisphere
78.8
Lateral lemniscal nuclei nTPM: 139.7
2320
Female, age 91, left hemisphere
182.8
2036
Male, age 80, both hemispheres
158.3
2453
Male, age 74, right hemisphere
122.7
2169
Male, age 76, both hemispheres
118.0
2746
Female, age 85, left hemisphere
117.0
Lateral parabrachial nucleus nTPM: 145.3
2792
Male, age 76, both hemispheres
194.2
2013
Male, age 80, both hemispheres
151.2
2790
Male, age 61, both hemispheres
143.0
2139
Female, age 85, right hemisphere
92.9
Lateral vestibular nucleus nTPM: 161.5
2311
Male, age 80, both hemispheres
182.4
2184
Male, age 76, both hemispheres
140.6
Locus coeruleus nTPM: 67.3
2720
Male, age 74, both hemispheres
97.1
2162
Male, age 80, both hemispheres
93.2
2317
Female, age 72, unknown
68.0
2788
Male, age 74, unknown
58.7
2123
Female, age 91, both hemispheres
58.6
2014
Male, age 55, unknown
53.5
1980
Male, age 76, both hemispheres
41.7
Medial parabrachial nucleus nTPM: 159.1
2170
Female, age 91, both hemispheres
199.9
2854
Male, age 80, both hemispheres
173.3
2463
Female, age 85, right hemisphere
157.9
2786
Male, age 76, both hemispheres
148.5
2156
Male, age 61, both hemispheres
115.9
Medial periolivary nuclei nTPM: 130.2
2458
Female, age 91, both hemispheres
175.6
2081
Male, age 80, both hemispheres
171.8
2791
Male, age 74, right hemisphere
127.0
2171
Female, age 85, both hemispheres
95.4
2063
Male, age 76, both hemispheres
81.4
Motor facial nucleus nTPM: 153.4
2126
Male, age 61, both hemispheres
209.7
2697
Female, age 85, both hemispheres
202.5
2365
Male, age 74, right hemisphere
151.1
2327
Male, age 80, both hemispheres
148.2
2795
Female, age 91, both hemispheres
132.6
2062
Male, age 76, both hemispheres
76.4
Motor trigeminal nucleus nTPM: 147.3
2321
Female, age 91, both hemispheres
192.8
2560
Male, age 74, both hemispheres
157.6
2079
Male, age 80, both hemispheres
134.5
2309
Male, age 76, both hemispheres
130.8
2335
Male, age 61, both hemispheres
121.0
Nuclei of the trapezoid body nTPM: 126.7
2166
Male, age 80, both hemispheres
186.9
2368
Female, age 91, both hemispheres
149.4
2159
Male, age 61, both hemispheres
136.9
1983
Male, age 76, both hemispheres
82.8
2735
Female, age 85, both hemispheres
77.8
Nucleus raphe magnus nTPM: 113.9
2328
Male, age 80, both hemispheres
172.1
2459
Female, age 91, both hemispheres
150.8
2455
Male, age 74, both hemispheres
117.9
2051
Male, age 76, both hemispheres
102.1
2172
Female, age 85, both hemispheres
80.5
2160
Male, age 61, both hemispheres
59.8
Paramedian reticular nucleus nTPM: 132.9
2057
Male, age 80, both hemispheres
142.6
2052
Male, age 76, both hemispheres
138.2
2050
Female, age 85, both hemispheres
134.2
2313
Male, age 61, both hemispheres
116.7
Pedunculopontine tegmental nucleus nTPM: 119.9
2338
Male, age 61, both hemispheres
129.6
2334
Male, age 80, both hemispheres
123.4
1921
Female, age 85, both hemispheres
106.8
Pontine nuclei nTPM: 145.2
2319
Female, age 91, both hemispheres
195.1
2454
Male, age 74, left hemisphere
188.7
2109
Female, age 72, unknown
152.7
2115
Male, age 80, left hemisphere
151.3
1863
Male, age 55, unknown
133.7
1968
Male, age 76, left hemisphere
130.5
2787
Female, age 85, both hemispheres
108.7
2727
Male, age 61, right hemisphere
100.7
Pontine raphe nucleus nTPM: 88.6
2122
Female, age 85, midline
90.8
2853
Male, age 76, midline
86.3
Posteroventral cochlear nucleus nTPM: 170.0
2135
Female, age 91, both hemispheres
233.6
2341
Male, age 80, both hemispheres
224.6
2070
Male, age 76, both hemispheres
153.9
2371
Male, age 61, both hemispheres
145.8
2752
Female, age 85, both hemispheres
91.9
Principal sensory trigeminal nucleus nTPM: 130.3
2367
Female, age 91, left hemisphere
194.6
2324
Male, age 76, both hemispheres
129.0
2008
Male, age 80, left hemisphere
116.3
2158
Male, age 61, both hemispheres
81.5
Reticular pontine nucleus, caudal nTPM: 163.5
2457
Female, age 91, both hemispheres
192.1
2559
Male, age 74, both hemispheres
179.0
2092
Male, age 76, both hemispheres
143.3
2332
Male, age 80, right hemisphere
139.4
Reticular pontine nucleus, oral nTPM: 166.4
2366
Female, age 91, both hemispheres
222.7
2361
Male, age 74, both hemispheres
169.6
1939
Male, age 80, both hemispheres
155.0
2167
Male, age 76, both hemispheres
148.3
2012
Female, age 85, both hemispheres
136.5
Reticulotegmental nucleus nTPM: 128.8
2322
Female, age 91, both hemispheres
164.5
2333
Male, age 80, both hemispheres
133.3
2452
Male, age 74, both hemispheres
132.4
2325
Male, age 76, both hemispheres
85.1
Spinal trigeminal nucleus, oral nTPM: 121.4
2164
Male, age 80, both hemispheres
162.4
1978
Male, age 76, both hemispheres
114.9
2737
Female, age 85, both hemispheres
87.0
Subcoeruleus area nTPM: 132.5
2369
Female, age 85, left hemisphere
211.6
2089
Male, age 76, left hemisphere
130.8
1958
Male, age 80, both hemispheres
124.0
2451
Male, age 74, both hemispheres
101.4
2323
Female, age 91, left hemisphere
94.7
Superior olive nTPM: 152.7
2329
Male, age 80, right hemisphere
191.8
2561
Female, age 91, both hemispheres
153.3
2020
Male, age 76, both hemispheres
150.5
2364
Male, age 74, right hemisphere
139.6
1875
Female, age 85, both hemispheres
128.6
Ventral periolivary nuclei nTPM: 128.8
2023
Male, age 76, both hemispheres
165.1
2165
Male, age 80, both hemispheres
143.7
2794
Female, age 91, left hemisphere
115.2
2130
Female, age 85, both hemispheres
91.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 151.2
2456
Female, age 91, both hemispheres
180.3
2840
Female, age 85, both hemispheres
165.9
2359
Male, age 61, both hemispheres
157.4
2161
Male, age 80, both hemispheres
141.3
1959
Male, age 76, both hemispheres
141.0
2449
Male, age 74, both hemispheres
121.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.7
Pig sample
Sample description
nTPM
Pons nTPM: 55.7
Samples: 4
Max nTPM: 94.5
Min nTPM: 37.5
Sample A
Female
37.5
Sample B
Female
41.4
Sample C
Male
49.4
Sample D
Male
94.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.