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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
112.0
nTPM
GTEx:
112.0
nTPM
FANTOM5:
143.0
Scaled Tags Per Million
Pig:
215.2
nTPM
Mouse:
333.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
112.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 112.0
Samples: 105
Max nTPM: 261.7
Min nTPM: 17.9
Std nTPM: 50.0
Median nTPM:
452_1
88 years, female
261.7
506_1
65 years, male
237.6
163_1
78 years, male
228.1
353_1
82 years, female
210.9
377_1
82 years, female
201.3
172_1
72 years, female
191.1
386_1
76 years, male
185.2
316_1
62 years, male
184.7
356_1
87 years, female
181.8
318_1
68 years, male
179.9
292_1
71 years, male
177.4
177_1
74 years, male
173.5
295_1
61 years, female
172.6
404_1
82 years, female
168.3
425_1
59 years, female
166.8
320_1
89 years, female
163.1
321_1
62 years, female
162.8
352_1
62 years, male
162.6
348_1
84 years, male
162.0
406_1
79 years, male
158.0
376_1
75 years, female
157.7
322_1
76 years, male
157.5
351_1
91 years, male
156.1
291_1
76 years, male
152.8
355_1
70 years, female
150.4
319_1
81 years, male
149.1
335_1
73 years, female
149.1
243_1
75 years, male
147.9
405_1
91 years, male
147.5
350_1
84 years, female
147.4
173_1
67 years, male
144.7
264_1
73 years, female
141.4
349_1
83 years, male
134.8
286_1
68 years, female
132.3
379_1
60 years, male
132.3
293_1
68 years, female
130.8
517_1
88 years, male
130.2
396_1
62 years, male
128.1
503_1
68 years, male
126.9
447_1
81 years, male
126.8
229_1
69 years, female
125.1
251_1
78 years, male
123.1
354_1
81 years, female
122.8
6_1
73 years, female
119.9
17_1
71 years, male
115.8
480_1
63 years, male
113.1
254_1
77 years, female
112.5
288_1
66 years, female
110.7
153_1
70 years, female
109.9
317_1
60 years, male
108.2
120_1
70 years, female
106.6
115_1
83 years, male
102.3
99_1
64 years, male
101.9
2_1
77 years, female
101.8
266_1
85 years, male
101.2
189_1
76 years, male
100.9
18_1
88 years, male
100.7
394_1
75 years, female
100.4
375_1
74 years, female
99.6
4_1
88 years, female
99.5
237_1
82 years, male
99.3
139_1
64 years, female
98.2
109_1
81 years, female
98.1
384_1
83 years, male
97.9
265_1
87 years, male
95.9
35_1
74 years, female
94.5
324_1
76 years, male
88.3
9_1
66 years, female
87.9
246_1
77 years, male
87.8
218_1
71 years, female
87.7
314_1
67 years, male
87.7
526_1
61 years, male
87.7
501_1
88 years, male
86.5
518_1
75 years, female
86.5
145_1
84 years, male
85.8
468_1
89 years, male
84.7
41_1
94 years, female
81.9
311_1
78 years, male
80.7
142_1
61 years, female
76.4
347_1
72 years, male
76.4
81_1
67 years, male
75.7
43_1
64 years, female
75.4
313_1
79 years, female
69.6
126_1
63 years, male
66.6
499_1
55 years, female
65.3
137_1
83 years, male
65.2
217_1
76 years, male
60.5
315_1
62 years, female
59.6
149_1
88 years, male
55.3
389_1
86 years, female
54.2
42_1
85 years, male
52.9
466_1
57 years, female
52.2
89_1
63 years, male
51.2
119_1
70 years, female
51.2
413_1
59 years, female
49.0
32_1
67 years, male
47.6
117_1
61 years, male
47.3
415_1
77 years, female
43.3
162_1
79 years, female
39.6
414_1
84 years, female
39.5
307_1
66 years, female
35.5
495_1
57 years, female
24.9
491_1
89 years, female
24.4
490_1
67 years, female
19.3
308_1
70 years, female
17.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.