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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
190.1
nTPM
HPA Brain:
224.1
nTPM
GTEx:
190.1
nTPM
FANTOM5:
225.8
Scaled Tags Per Million
Pig:
133.4
nTPM
Mouse:
147.9
nTPM
Allen mouse:
7.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
224.1
Sample id
Sample description
nTPM
Amygdala nTPM: 216.7
2695
Female, age 67, right hemisphere
252.6
1987
Female, age 91, left hemisphere
251.0
2517
Female, age 94, left hemisphere
223.7
2514
Male, age 75, right hemisphere
213.1
2814
Male, age 76, right hemisphere
143.3
Basal amygdala nTPM: 197.6
2609
Male, age 75, right hemisphere
289.2
2243
Female, age 91, right hemisphere
197.6
2110
Male, age 80, left hemisphere
183.5
2685
Female, age 94, left hemisphere
173.4
1955
Male, age 76, both hemispheres
172.3
2827
Female, age 67, right hemisphere
169.6
Central amygdala nTPM: 224.1
2515
Male, age 75, right hemisphere
311.6
2826
Female, age 94, left hemisphere
241.2
2701
Female, age 91, right hemisphere
204.7
2239
Male, age 80, left hemisphere
192.8
1905
Male, age 76, both hemispheres
170.0
Corticomedial amygdala nTPM: 179.2
2428
Male, age 75, right hemisphere
250.2
2829
Male, age 80, left hemisphere
201.6
2242
Female, age 91, right hemisphere
200.0
2535
Female, age 67, right hemisphere
146.4
2429
Female, age 94, left hemisphere
138.4
2240
Male, age 76, both hemispheres
138.3
Lateral amygdala nTPM: 218.9
2516
Male, age 75, right hemisphere
276.1
2256
Male, age 80, left hemisphere
246.8
2830
Female, age 67, right hemisphere
225.4
2255
Female, age 91, right hemisphere
223.6
2534
Female, age 94, left hemisphere
189.2
1883
Male, age 76, both hemispheres
152.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
190.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 190.1
Samples: 152
Max nTPM: 467.9
Min nTPM: 1.5
Std nTPM: 85.9
Median nTPM: 183.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
467.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
432.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
400.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
392.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
387.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
360.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
352.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
342.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
329.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
320.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
318.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
314.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
304.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
302.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
301.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
301.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
300.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
294.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
291.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
287.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
283.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
275.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
275.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
274.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
270.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
265.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
261.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
259.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
258.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
257.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
254.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
250.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
249.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
249.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
248.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
245.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
243.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
242.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
240.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
238.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
235.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
234.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
234.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
233.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
232.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
231.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
230.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
229.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
225.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
225.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
220.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
220.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
220.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
219.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
218.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
218.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
213.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
211.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
210.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
209.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
209.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
208.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
207.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
206.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
206.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
205.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
203.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
199.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
198.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
196.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
196.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
196.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
189.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
188.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
188.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
187.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
180.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
176.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
176.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
175.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
175.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
173.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
171.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
171.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
171.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
169.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
169.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
166.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
163.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
163.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
162.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
162.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
162.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
160.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
157.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
156.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
155.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
155.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
155.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
154.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
154.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
151.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
147.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
147.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
143.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
142.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
142.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
142.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
134.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
134.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
133.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
133.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
132.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
132.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
131.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
130.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
128.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
128.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
128.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
126.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
124.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
122.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
121.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
117.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
116.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
116.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
111.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
111.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
110.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
109.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
107.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
101.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
99.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
98.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
95.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
91.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
90.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
82.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
76.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
64.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
58.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
56.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
55.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
54.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
52.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
41.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
37.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
35.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
31.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
30.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
19.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
147.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 147.9
Samples: 4
Max nTPM: 162.4
Min nTPM: 136.5
Sample A
Male
136.5
Sample B
Male
140.6
Sample C
Female
162.4
Sample D
Female
152.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.