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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
848.9
nTPM
FANTOM5:
409.1
Scaled Tags Per Million
Pig:
261.8
nTPM
Allen mouse:
10.8
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
848.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 249.4
1984
Male, age 76, both hemispheres
472.8
2188
Female, age 91, both hemispheres
221.9
2301
Female, age 85, both hemispheres
198.7
2090
Male, age 80, both hemispheres
104.2
Dorsal cochlear nucleus nTPM: 199.1
2802
Male, age 74, right hemisphere
249.5
2187
Female, age 91, both hemispheres
237.6
2370
Male, age 61, both hemispheres
188.9
2378
Male, age 80, both hemispheres
169.8
2058
Male, age 76, both hemispheres
149.6
Dorsal tegmental nucleus nTPM: 231.4
2083
Male, age 80, both hemispheres
284.8
2358
Male, age 61, both hemispheres
263.1
1936
Male, age 76, left hemisphere
252.9
2326
Male, age 74, both hemispheres
124.6
Dorsolateral tegmental area nTPM: 104.8
2654
Male, age 80, both hemispheres
159.6
2751
Female, age 85, both hemispheres
116.5
2141
Male, age 76, both hemispheres
102.4
2360
Male, age 74, both hemispheres
99.7
2337
Male, age 61, both hemispheres
46.1
Kolliker-Fuse nucleus nTPM: 637.6
2163
Male, age 80, both hemispheres
1447.4
2793
Female, age 91, left hemisphere
362.4
2315
Male, age 76, right hemisphere
103.1
Lateral lemniscal nuclei nTPM: 499.2
2453
Male, age 74, right hemisphere
916.8
2169
Male, age 76, both hemispheres
645.6
2320
Female, age 91, left hemisphere
389.0
2746
Female, age 85, left hemisphere
292.5
2036
Male, age 80, both hemispheres
252.2
Lateral parabrachial nucleus nTPM: 234.4
2139
Female, age 85, right hemisphere
417.4
2790
Male, age 61, both hemispheres
243.1
2013
Male, age 80, both hemispheres
195.4
2792
Male, age 76, both hemispheres
81.7
Lateral vestibular nucleus nTPM: 848.9
2184
Male, age 76, both hemispheres
1482.3
2311
Male, age 80, both hemispheres
215.4
Locus coeruleus nTPM: 245.0
2720
Male, age 74, both hemispheres
533.7
2123
Female, age 91, both hemispheres
397.7
2014
Male, age 55, unknown
173.9
2162
Male, age 80, both hemispheres
165.2
1980
Male, age 76, both hemispheres
161.1
2317
Female, age 72, unknown
150.7
2788
Male, age 74, unknown
132.8
Medial parabrachial nucleus nTPM: 274.2
2156
Male, age 61, both hemispheres
578.3
2854
Male, age 80, both hemispheres
351.4
2786
Male, age 76, both hemispheres
189.6
2170
Female, age 91, both hemispheres
128.5
2463
Female, age 85, right hemisphere
123.0
Medial periolivary nuclei nTPM: 438.7
2171
Female, age 85, both hemispheres
772.7
2063
Male, age 76, both hemispheres
541.8
2458
Female, age 91, both hemispheres
351.0
2791
Male, age 74, right hemisphere
319.3
2081
Male, age 80, both hemispheres
208.6
Motor facial nucleus nTPM: 471.9
2365
Male, age 74, right hemisphere
660.2
2062
Male, age 76, both hemispheres
579.6
2327
Male, age 80, both hemispheres
541.9
2697
Female, age 85, both hemispheres
435.4
2126
Male, age 61, both hemispheres
314.3
2795
Female, age 91, both hemispheres
299.9
Motor trigeminal nucleus nTPM: 281.1
2079
Male, age 80, both hemispheres
434.9
2560
Male, age 74, both hemispheres
339.9
2321
Female, age 91, both hemispheres
246.9
2335
Male, age 61, both hemispheres
218.1
2309
Male, age 76, both hemispheres
165.7
Nuclei of the trapezoid body nTPM: 542.8
2159
Male, age 61, both hemispheres
920.1
2735
Female, age 85, both hemispheres
514.1
1983
Male, age 76, both hemispheres
509.1
2166
Male, age 80, both hemispheres
418.5
2368
Female, age 91, both hemispheres
352.4
Nucleus raphe magnus nTPM: 667.8
2455
Male, age 74, both hemispheres
998.8
2160
Male, age 61, both hemispheres
906.5
2172
Female, age 85, both hemispheres
802.6
2328
Male, age 80, both hemispheres
524.6
2051
Male, age 76, both hemispheres
401.5
2459
Female, age 91, both hemispheres
372.8
Paramedian reticular nucleus nTPM: 334.3
2050
Female, age 85, both hemispheres
490.0
2313
Male, age 61, both hemispheres
366.9
2057
Male, age 80, both hemispheres
328.9
2052
Male, age 76, both hemispheres
151.2
Pedunculopontine tegmental nucleus nTPM: 170.0
2338
Male, age 61, both hemispheres
241.0
2334
Male, age 80, both hemispheres
141.4
1921
Female, age 85, both hemispheres
127.7
Pontine nuclei nTPM: 464.8
2727
Male, age 61, right hemisphere
648.1
2787
Female, age 85, both hemispheres
622.0
1863
Male, age 55, unknown
569.7
2454
Male, age 74, left hemisphere
512.8
1968
Male, age 76, left hemisphere
506.9
2109
Female, age 72, unknown
364.3
2115
Male, age 80, left hemisphere
286.5
2319
Female, age 91, both hemispheres
208.4
Pontine raphe nucleus nTPM: 222.2
2122
Female, age 85, midline
359.9
2853
Male, age 76, midline
84.5
Posteroventral cochlear nucleus nTPM: 217.2
2752
Female, age 85, both hemispheres
338.9
2070
Male, age 76, both hemispheres
299.7
2341
Male, age 80, both hemispheres
220.5
2371
Male, age 61, both hemispheres
210.3
2135
Female, age 91, both hemispheres
16.5
Principal sensory trigeminal nucleus nTPM: 673.6
2324
Male, age 76, both hemispheres
1146.3
2158
Male, age 61, both hemispheres
804.6
2008
Male, age 80, left hemisphere
405.5
2367
Female, age 91, left hemisphere
338.0
Reticular pontine nucleus, caudal nTPM: 377.6
2332
Male, age 80, right hemisphere
669.0
2092
Male, age 76, both hemispheres
370.8
2457
Female, age 91, both hemispheres
365.1
2559
Male, age 74, both hemispheres
105.4
Reticular pontine nucleus, oral nTPM: 298.1
2361
Male, age 74, both hemispheres
550.3
2366
Female, age 91, both hemispheres
343.1
2012
Female, age 85, both hemispheres
281.2
1939
Male, age 80, both hemispheres
165.9
2167
Male, age 76, both hemispheres
149.9
Reticulotegmental nucleus nTPM: 403.2
2322
Female, age 91, both hemispheres
521.9
2333
Male, age 80, both hemispheres
385.8
2325
Male, age 76, both hemispheres
353.9
2452
Male, age 74, both hemispheres
351.3
Spinal trigeminal nucleus, oral nTPM: 823.1
2164
Male, age 80, both hemispheres
1575.5
2737
Female, age 85, both hemispheres
715.2
1978
Male, age 76, both hemispheres
178.7
Subcoeruleus area nTPM: 205.5
2089
Male, age 76, left hemisphere
371.3
1958
Male, age 80, both hemispheres
295.3
2323
Female, age 91, left hemisphere
170.9
2451
Male, age 74, both hemispheres
111.1
2369
Female, age 85, left hemisphere
79.1
Superior olive nTPM: 378.3
2329
Male, age 80, right hemisphere
430.6
2364
Male, age 74, right hemisphere
401.3
1875
Female, age 85, both hemispheres
401.1
2561
Female, age 91, both hemispheres
365.6
2020
Male, age 76, both hemispheres
292.9
Ventral periolivary nuclei nTPM: 458.5
2165
Male, age 80, both hemispheres
699.8
2130
Female, age 85, both hemispheres
496.6
2794
Female, age 91, left hemisphere
416.1
2023
Male, age 76, both hemispheres
221.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 400.6
2449
Male, age 74, both hemispheres
865.1
2840
Female, age 85, both hemispheres
506.0
1959
Male, age 76, both hemispheres
357.2
2161
Male, age 80, both hemispheres
336.3
2456
Female, age 91, both hemispheres
217.1
2359
Male, age 61, both hemispheres
121.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
261.8
Pig sample
Sample description
nTPM
Pons nTPM: 261.8
Samples: 4
Max nTPM: 501.6
Min nTPM: 115.4
Sample A
Female
246.2
Sample B
Female
115.4
Sample C
Male
184.0
Sample D
Male
501.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.