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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS15 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.63
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.0022
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
41%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
51%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
31.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
26.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
26.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
22.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
20.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
20.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
19.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
18.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
18.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
17.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
17.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
17.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
17.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
16.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
16.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
16.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
15.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
15.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
14.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
14.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
14.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
14.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
13.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
13.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
13.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
13.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
13.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
12.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
12.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
11.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
11.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
11.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
10.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
10.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
10.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
10.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
10.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
9.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
9.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
8.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
8.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
8.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
8.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
8.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
8.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
7.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
6.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
5.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
5.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS15 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 2.14
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.19
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
55%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
0%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
231
Samples
Sample
Description
TPM
DO45287
0 years, male, NA, stage:1, alive, 390 days
27.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
24.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
22.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
21.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
21.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
21.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
20.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
19.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
18.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
18.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
18.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
18.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
18.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
18.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
17.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
17.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
17.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
16.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
16.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
16.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
16.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
16.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
16.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
16.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
15.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
15.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
15.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
15.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
15.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
15.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
15.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
14.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
14.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
14.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
14.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
13.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
13.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
13.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
13.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
13.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
12.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
12.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
12.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
12.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
12.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
12.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
12.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
12.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
12.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
12.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
11.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
11.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
11.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
11.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
11.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
10.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
10.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
10.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
10.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
10.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
10.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
10.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
10.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
10.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
9.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
9.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
9.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
8.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
7.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
6.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
5.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
0.8
492
Normal
0.5
954
Normal
0.5
867
Tumor
0.4
911
Tumor
0.4
498
Normal
0.4
778
Normal
0.4
686
Normal
0.4
536
Normal
0.4
861
Tumor
0.4
537
Tumor
0.4
696
Normal
0.4
952
Normal
0.4
478
Normal
0.4
955
Tumor
0.4
488
Normal
0.4
922
Normal
0.4
714
Normal
0.4
484
Normal
0.4
957
Tumor
0.4
554
Normal
0.4
524
Normal
0.4
966
Normal
0.4
1014
Normal
0.4
958
Normal
0.4
487
Tumor
0.4
968
Normal
0.4
926
Normal
0.3
925
Tumor
0.3
916
Normal
0.3
481
Tumor
0.3
964
Normal
0.3
984
Normal
0.3
415
Tumor
0.3
978
Normal
0.3
884
Normal
0.3
518
Normal
0.3
1028
Normal
0.3
695
Tumor
0.3
882
Normal
0.3
425
Tumor
0.3
514
Normal
0.3
944
Normal
0.3
976
Normal
0.3
918
Normal
0.3
915
Tumor
0.3
538
Normal
0.3
756
Normal
0.3
716
Normal
0.3
938
Normal
0.3
472
Normal
0.3
494
Normal
0.3
526
Normal
0.3
723
Tumor
0.3
558
Normal
0.3
738
Normal
0.3
912
Normal
0.3
737
Tumor
0.3
546
Normal
0.3
516
Normal
0.3
474
Normal
0.3
1022
Normal
0.3
523
Tumor
0.3
721
Tumor
0.3
444
Normal
0.3
728
Normal
0.3
868
Normal
0.3
412
Normal
0.3
527
Tumor
0.2
482
Normal
0.2
981
Tumor
0.2
528
Normal
0.2
786
Normal
0.2
1032
Normal
0.2
943
Tumor
0.2
1015
Tumor
0.2
434
Normal
0.2
864
Normal
0.2
572
Normal
0.2
212
Normal
0.2
866
Normal
0.2
1045
Tumor
0.2
137
Tumor
0.2
574
Normal
0.2
878
Normal
0.2
448
Normal
0.2
356
Normal
0.2
924
Normal
0.2
461
Tumor
0.2
742
Normal
0.2
573
Tumor
0.2
722
Normal
0.2
1046
Normal
0.2
914
Normal
0.2
874
Normal
0.2
568
Normal
0.2
858
Normal
0.2
257
Tumor
0.2
462
Normal
0.2
1016
Normal
0.2
1044
Normal
0.2
284
Normal
0.2
744
Normal
0.2
698
Normal
0.2
1042
Normal
0.2
746
Normal
0.2
224
Normal
0.2
534
Normal
0.2
852
Normal
0.2
956
Normal
0.2
636
Normal
0.2
283
Tumor
0.2
191
Tumor
0.2
515
Tumor
0.2
376
Normal
0.2
1026
Normal
0.2
818
Normal
0.2
468
Normal
0.2
666
Normal
0.2
328
Normal
0.2
824
Normal
0.2
125
Tumor
0.2
615
Tumor
0.2
741
Tumor
0.2
228
Normal
0.2
483
Tumor
0.2
1041
Tumor
0.1
563
Tumor
0.1
862
Normal
0.1
327
Tumor
0.1
493
Tumor
0.1
628
Normal
0.1
396
Normal
0.1
416
Normal
0.1
431
Tumor
0.1
421
Tumor
0.1
364
Normal
0.1
392
Normal
0.1
664
Normal
0.1
344
Normal
0.1
1021
Tumor
0.1
311
Tumor
0.1
286
Normal
0.1
192
Normal
0.1
816
Normal
0.1
477
Tumor
0.1
616
Normal
0.1
564
Normal
0.1
814
Normal
0.1
785
Tumor
0.1
432
Normal
0.1
647
Tumor
0.1
982
Normal
0.1
724
Normal
0.1
917
Tumor
0.1
745
Tumor
0.1
126
Normal
0.1
727
Tumor
0.1
648
Normal
0.1
352
Normal
0.1
298
Normal
0.1
823
Tumor
0.1
913
Tumor
0.1
662
Normal
0.1
618
Normal
0.1
423
Tumor
0.1
857
Tumor
0.1
365
Tumor
0.1
142
Normal
0.1
513
Tumor
0.1
777
Tumor
0.1
617
Tumor
0.1
533
Tumor
0.1
353
Tumor
0.1
424
Normal
0.1
963
Tumor
0.1
414
Normal
0.1
491
Tumor
0.1
467
Tumor
0.1
355
Tumor
0.1
124
Normal
0.1
386
Normal
0.1
393
Tumor
0.1
362
Normal
0.1
863
Tumor
0.1
272
Normal
0.1
436
Normal
0.1
525
Tumor
0.1
114
Normal
0.1
883
Tumor
0.1
138
Normal
0.1
368
Normal
0.1
262
Normal
0.0
136
Normal
0.0
384
Normal
0.0
218
Normal
0.0
672
Normal
0.0
358
Normal
0.0
148
Normal
0.0
354
Normal
0.0
387
Tumor
0.0
231
Tumor
0.0
232
Normal
0.0
456
Normal
0.0
1027
Tumor
0.0
446
Normal
0.0
464
Normal
0.0
953
Tumor
0.0
146
Normal
0.0
426
Normal
0.0
471
Tumor
0.0
132
Normal
0.0
213
Tumor
0.0
422
Normal
0.0
342
Normal
0.0
366
Normal
0.0
642
Normal
0.0
222
Normal
0.0
452
Normal
0.0
332
Normal
0.0
1025
Tumor
0.0
195
Tumor
N/A
258
Normal
0.0
188
Normal
0.0
685
Tumor
0.0
196
Normal
0.0
851
Tumor
0.0
394
Normal
0.0
455
Tumor
0.0
214
Normal
0.0
428
Normal
0.0
268
Normal
0.0
975
Tumor
0.0
627
Tumor
0.0
755
Tumor
0.0
466
Normal
0.0
145
Tumor
0.0
395
Tumor
0.0
881
Tumor
0.0
278
Normal
0.0
473
Tumor
0.0
128
Normal
0.0
111
Normal
0.0
341
Tumor
0.0
312
Normal
0.0
185
Tumor
0.0
977
Tumor
0.0
661
Tumor
0.0
162
Normal
-0.1
873
Tumor
-0.1
817
Tumor
-0.1
314
Normal
-0.1
447
Tumor
-0.1
187
Tumor
-0.1
937
Tumor
-0.1
463
Tumor
-0.1
171
Tumor
-0.1
553
Tumor
-0.1
261
Tumor
-0.1
1013
Tumor
-0.1
186
Normal
-0.1
172
Normal
-0.1
445
Tumor
-0.1
865
Tumor
-0.1
535
Tumor
-0.1
391
Tumor
-0.1
388
Normal
-0.1
951
Tumor
-0.1
567
Tumor
-0.1
443
Tumor
-0.1
217
Tumor
-0.1
375
Tumor
-0.1
223
Tumor
-0.1
131
Tumor
-0.1
635
Tumor
-0.1
141
Tumor
-0.1
497
Tumor
-0.1
545
Tumor
-0.2
433
Tumor
-0.2
663
Tumor
-0.2
557
Tumor
-0.2
517
Tumor
-0.2
361
Tumor
-0.2
451
Tumor
-0.2
965
Tumor
-0.2
427
Tumor
-0.2
813
Tumor
-0.2
113
Tumor
-0.2
411
Tumor
-0.2
297
Tumor
-0.2
665
Tumor
-0.2
383
Tumor
-0.2
465
Tumor
-0.2
1031
Tumor
-0.2
343
Tumor
-0.3
277
Tumor
-0.3
367
Tumor
-0.3
161
Tumor
-0.3
435
Tumor
-0.3
1043
Tumor
-0.3
135
Tumor
-0.3
413
Tumor
-0.3
923
Tumor
-0.3
267
Tumor
-0.3
313
Tumor
-0.3
385
Tumor
-0.4
967
Tumor
-0.4
641
Tumor
-0.4
921
Tumor
-0.4
357
Tumor
-0.4
697
Tumor
-0.4
271
Tumor
-0.4
123
Tumor
-0.5
147
Tumor
-0.5
127
Tumor
-0.5
713
Tumor
-0.5
715
Tumor
-0.5
571
Tumor
-0.5
983
Tumor
-0.5
331
Tumor
-0.6
363
Tumor
-0.6
743
Tumor
-0.6
227
Tumor
-0.7
221
Tumor
-0.7
815
Tumor
-0.7
112
Tumor
-0.7
671
Tumor
-0.7
285
Tumor
-0.8
351
Tumor
-0.9
877
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.