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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
277.6
nTPM
GTEx:
277.6
nTPM
FANTOM5:
138.4
Scaled Tags Per Million
Pig:
433.9
nTPM
Mouse:
298.4
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
277.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 277.6
Samples: 105
Max nTPM: 460.9
Min nTPM: 144.2
Std nTPM: 65.9
Median nTPM:
162_1
79 years, female
460.9
217_1
76 years, male
421.1
266_1
85 years, male
416.6
414_1
84 years, female
410.5
405_1
91 years, male
387.8
149_1
88 years, male
386.0
142_1
61 years, female
385.8
415_1
77 years, female
376.6
286_1
68 years, female
376.1
308_1
70 years, female
375.4
335_1
73 years, female
371.9
137_1
83 years, male
366.8
115_1
83 years, male
366.7
32_1
67 years, male
362.9
6_1
73 years, female
360.2
126_1
63 years, male
358.9
109_1
81 years, female
354.2
172_1
72 years, female
345.1
265_1
87 years, male
341.4
117_1
61 years, male
340.4
229_1
69 years, female
339.7
503_1
68 years, male
338.6
349_1
83 years, male
337.7
413_1
59 years, female
325.3
237_1
82 years, male
322.9
246_1
77 years, male
320.6
495_1
57 years, female
319.7
468_1
89 years, male
318.9
377_1
82 years, female
316.9
81_1
67 years, male
316.2
466_1
57 years, female
312.0
315_1
62 years, female
309.5
9_1
66 years, female
308.9
243_1
75 years, male
307.5
319_1
81 years, male
304.7
396_1
62 years, male
304.3
499_1
55 years, female
304.1
139_1
64 years, female
302.1
153_1
70 years, female
300.2
35_1
74 years, female
298.6
99_1
64 years, male
295.7
350_1
84 years, female
295.3
348_1
84 years, male
289.5
356_1
87 years, female
288.0
17_1
71 years, male
287.0
313_1
79 years, female
284.1
18_1
88 years, male
282.1
316_1
62 years, male
277.3
324_1
76 years, male
276.2
501_1
88 years, male
276.1
43_1
64 years, female
274.5
163_1
78 years, male
274.4
389_1
86 years, female
273.4
518_1
75 years, female
269.9
355_1
70 years, female
269.8
311_1
78 years, male
266.4
322_1
76 years, male
265.4
4_1
88 years, female
264.8
376_1
75 years, female
263.4
526_1
61 years, male
261.8
351_1
91 years, male
260.7
177_1
74 years, male
258.1
425_1
59 years, female
256.8
386_1
76 years, male
246.8
352_1
62 years, male
244.1
404_1
82 years, female
243.6
406_1
79 years, male
242.9
2_1
77 years, female
240.6
317_1
60 years, male
239.4
119_1
70 years, female
239.3
189_1
76 years, male
238.1
379_1
60 years, male
236.5
254_1
77 years, female
235.0
318_1
68 years, male
234.5
120_1
70 years, female
234.4
264_1
73 years, female
234.1
490_1
67 years, female
230.2
394_1
75 years, female
229.1
288_1
66 years, female
228.6
353_1
82 years, female
227.2
375_1
74 years, female
227.2
517_1
88 years, male
225.9
89_1
63 years, male
225.4
145_1
84 years, male
224.1
292_1
71 years, male
223.3
354_1
81 years, female
222.0
320_1
89 years, female
221.1
251_1
78 years, male
220.8
480_1
63 years, male
207.7
452_1
88 years, female
206.5
447_1
81 years, male
204.7
42_1
85 years, male
204.1
314_1
67 years, male
204.1
293_1
68 years, female
201.2
295_1
61 years, female
191.5
506_1
65 years, male
187.1
491_1
89 years, female
186.4
384_1
83 years, male
183.7
291_1
76 years, male
180.0
173_1
67 years, male
175.1
307_1
66 years, female
173.8
218_1
71 years, female
168.4
347_1
72 years, male
165.7
321_1
62 years, female
164.5
41_1
94 years, female
144.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
