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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
210.7
nTPM
FANTOM5:
73.5
Scaled Tags Per Million
Pig:
74.1
nTPM
Allen mouse:
8.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
210.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 113.8
2301
Female, age 85, both hemispheres
134.4
1984
Male, age 76, both hemispheres
124.7
2090
Male, age 80, both hemispheres
117.1
2188
Female, age 91, both hemispheres
78.8
Dorsal cochlear nucleus nTPM: 166.0
2802
Male, age 74, right hemisphere
197.3
2370
Male, age 61, both hemispheres
183.8
2058
Male, age 76, both hemispheres
173.2
2378
Male, age 80, both hemispheres
165.1
2187
Female, age 91, both hemispheres
110.4
Dorsal tegmental nucleus nTPM: 141.7
1936
Male, age 76, left hemisphere
159.2
2326
Male, age 74, both hemispheres
143.1
2083
Male, age 80, both hemispheres
140.3
2358
Male, age 61, both hemispheres
124.2
Dorsolateral tegmental area nTPM: 125.6
2141
Male, age 76, both hemispheres
180.0
2360
Male, age 74, both hemispheres
138.3
2654
Male, age 80, both hemispheres
135.4
2751
Female, age 85, both hemispheres
113.3
2337
Male, age 61, both hemispheres
60.8
Kolliker-Fuse nucleus nTPM: 140.0
2315
Male, age 76, right hemisphere
183.9
2163
Male, age 80, both hemispheres
131.8
2793
Female, age 91, left hemisphere
104.2
Lateral lemniscal nuclei nTPM: 179.8
2036
Male, age 80, both hemispheres
237.5
2169
Male, age 76, both hemispheres
207.3
2746
Female, age 85, left hemisphere
192.0
2453
Male, age 74, right hemisphere
155.5
2320
Female, age 91, left hemisphere
106.7
Lateral parabrachial nucleus nTPM: 162.5
2139
Female, age 85, right hemisphere
251.3
2013
Male, age 80, both hemispheres
159.6
2790
Male, age 61, both hemispheres
123.4
2792
Male, age 76, both hemispheres
115.7
Lateral vestibular nucleus nTPM: 147.9
2184
Male, age 76, both hemispheres
156.8
2311
Male, age 80, both hemispheres
139.1
Locus coeruleus nTPM: 210.7
2317
Female, age 72, unknown
239.9
2014
Male, age 55, unknown
233.3
2123
Female, age 91, both hemispheres
218.5
1980
Male, age 76, both hemispheres
214.0
2162
Male, age 80, both hemispheres
197.5
2788
Male, age 74, unknown
194.8
2720
Male, age 74, both hemispheres
176.8
Medial parabrachial nucleus nTPM: 123.9
2854
Male, age 80, both hemispheres
137.3
2786
Male, age 76, both hemispheres
137.0
2156
Male, age 61, both hemispheres
127.6
2463
Female, age 85, right hemisphere
120.3
2170
Female, age 91, both hemispheres
97.1
Medial periolivary nuclei nTPM: 183.2
2171
Female, age 85, both hemispheres
251.2
2063
Male, age 76, both hemispheres
243.6
2791
Male, age 74, right hemisphere
170.9
2081
Male, age 80, both hemispheres
133.5
2458
Female, age 91, both hemispheres
116.5
Motor facial nucleus nTPM: 188.5
2062
Male, age 76, both hemispheres
264.0
2327
Male, age 80, both hemispheres
222.3
2795
Female, age 91, both hemispheres
214.3
2365
Male, age 74, right hemisphere
156.9
2697
Female, age 85, both hemispheres
154.0
2126
Male, age 61, both hemispheres
119.4
Motor trigeminal nucleus nTPM: 143.3
2079
Male, age 80, both hemispheres
205.7
2309
Male, age 76, both hemispheres
150.7
2560
Male, age 74, both hemispheres
134.0
2335
Male, age 61, both hemispheres
121.6
2321
Female, age 91, both hemispheres
104.5
Nuclei of the trapezoid body nTPM: 201.5
2735
Female, age 85, both hemispheres
281.9
1983
Male, age 76, both hemispheres
229.6
2166
Male, age 80, both hemispheres
179.9
2368
Female, age 91, both hemispheres
169.6
2159
Male, age 61, both hemispheres
146.6
Nucleus raphe magnus nTPM: 183.8
2172
Female, age 85, both hemispheres
260.4
2328
Male, age 80, both hemispheres
191.2
2051
Male, age 76, both hemispheres
186.1
2160
Male, age 61, both hemispheres
182.0
2455
Male, age 74, both hemispheres
168.7
2459
Female, age 91, both hemispheres
114.6
Paramedian reticular nucleus nTPM: 122.1
2050
Female, age 85, both hemispheres
153.9
2057
Male, age 80, both hemispheres
119.1
2313
Male, age 61, both hemispheres
117.2
2052
Male, age 76, both hemispheres
98.3
Pedunculopontine tegmental nucleus nTPM: 138.4
1921
Female, age 85, both hemispheres
163.8
2334
Male, age 80, both hemispheres
161.7
2338
Male, age 61, both hemispheres
89.8
Pontine nuclei nTPM: 140.6
2787
Female, age 85, both hemispheres
243.6
1968
Male, age 76, left hemisphere
185.7
1863
Male, age 55, unknown
168.7
2115
Male, age 80, left hemisphere
147.7
2109
Female, age 72, unknown
115.9
2727
Male, age 61, right hemisphere
115.9
2319
Female, age 91, both hemispheres
86.7
2454
Male, age 74, left hemisphere
60.8
Pontine raphe nucleus nTPM: 177.3
2122
Female, age 85, midline
180.6
2853
Male, age 76, midline
174.1
Posteroventral cochlear nucleus nTPM: 111.0
2371
Male, age 61, both hemispheres
174.8
2752
Female, age 85, both hemispheres
139.7
2070
Male, age 76, both hemispheres
134.9
2341
Male, age 80, both hemispheres
63.3
2135
Female, age 91, both hemispheres
42.3
Principal sensory trigeminal nucleus nTPM: 158.8
2008
Male, age 80, left hemisphere
211.4
2158
Male, age 61, both hemispheres
167.6
2324
Male, age 76, both hemispheres
158.2
2367
Female, age 91, left hemisphere
98.2
Reticular pontine nucleus, caudal nTPM: 143.9
2092
Male, age 76, both hemispheres
193.8
2332
Male, age 80, right hemisphere
191.3
2457
Female, age 91, both hemispheres
109.2
2559
Male, age 74, both hemispheres
81.3
Reticular pontine nucleus, oral nTPM: 123.8
2012
Female, age 85, both hemispheres
169.6
2167
Male, age 76, both hemispheres
143.5
1939
Male, age 80, both hemispheres
126.7
2366
Female, age 91, both hemispheres
89.9
2361
Male, age 74, both hemispheres
89.5
Reticulotegmental nucleus nTPM: 145.4
2325
Male, age 76, both hemispheres
200.2
2333
Male, age 80, both hemispheres
139.3
2322
Female, age 91, both hemispheres
122.8
2452
Male, age 74, both hemispheres
119.2
Spinal trigeminal nucleus, oral nTPM: 119.0
1978
Male, age 76, both hemispheres
121.7
2737
Female, age 85, both hemispheres
119.8
2164
Male, age 80, both hemispheres
115.5
Subcoeruleus area nTPM: 162.9
2089
Male, age 76, left hemisphere
208.3
2451
Male, age 74, both hemispheres
176.3
1958
Male, age 80, both hemispheres
165.7
2323
Female, age 91, left hemisphere
157.9
2369
Female, age 85, left hemisphere
106.3
Superior olive nTPM: 169.7
1875
Female, age 85, both hemispheres
210.3
2329
Male, age 80, right hemisphere
179.8
2020
Male, age 76, both hemispheres
177.9
2364
Male, age 74, right hemisphere
143.0
2561
Female, age 91, both hemispheres
137.6
Ventral periolivary nuclei nTPM: 206.3
2130
Female, age 85, both hemispheres
283.7
2165
Male, age 80, both hemispheres
230.1
2023
Male, age 76, both hemispheres
164.9
2794
Female, age 91, left hemisphere
146.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 160.4
1959
Male, age 76, both hemispheres
197.3
2161
Male, age 80, both hemispheres
188.7
2449
Male, age 74, both hemispheres
158.6
2456
Female, age 91, both hemispheres
144.7
2359
Male, age 61, both hemispheres
139.6
2840
Female, age 85, both hemispheres
133.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.1
Pig sample
Sample description
nTPM
Pons nTPM: 74.1
Samples: 4
Max nTPM: 83.3
Min nTPM: 70.8
Sample A
Female
71.1
Sample B
Female
83.3
Sample C
Male
71.2
Sample D
Male
70.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.