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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
46.2
nTPM
HPA Brain:
214.7
nTPM
GTEx:
46.2
nTPM
FANTOM5:
92.8
Scaled Tags Per Million
Pig:
71.6
nTPM
Mouse:
72.4
nTPM
Allen mouse:
9.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
214.7
Sample id
Sample description
nTPM
Amygdala nTPM: 195.8
2695
Female, age 67, right hemisphere
268.9
1987
Female, age 91, left hemisphere
205.2
2514
Male, age 75, right hemisphere
178.7
2517
Female, age 94, left hemisphere
170.2
2814
Male, age 76, right hemisphere
155.9
Basal amygdala nTPM: 166.7
2609
Male, age 75, right hemisphere
262.0
2243
Female, age 91, right hemisphere
175.4
2685
Female, age 94, left hemisphere
161.1
1955
Male, age 76, both hemispheres
147.8
2827
Female, age 67, right hemisphere
129.6
2110
Male, age 80, left hemisphere
124.2
Central amygdala nTPM: 214.7
2515
Male, age 75, right hemisphere
296.1
2701
Female, age 91, right hemisphere
230.7
1905
Male, age 76, both hemispheres
189.5
2826
Female, age 94, left hemisphere
187.6
2239
Male, age 80, left hemisphere
169.6
Corticomedial amygdala nTPM: 174.8
2428
Male, age 75, right hemisphere
240.3
2242
Female, age 91, right hemisphere
205.1
2829
Male, age 80, left hemisphere
184.3
2429
Female, age 94, left hemisphere
145.7
2240
Male, age 76, both hemispheres
143.6
2535
Female, age 67, right hemisphere
129.6
Lateral amygdala nTPM: 181.5
2516
Male, age 75, right hemisphere
241.5
1883
Male, age 76, both hemispheres
195.7
2255
Female, age 91, right hemisphere
192.4
2256
Male, age 80, left hemisphere
164.4
2830
Female, age 67, right hemisphere
152.2
2534
Female, age 94, left hemisphere
142.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
46.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 46.2
Samples: 152
Max nTPM: 111.1
Min nTPM: 0.7
Std nTPM: 20.2
Median nTPM: 42.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
111.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
106.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
97.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
95.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
92.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
92.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
87.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
82.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
82.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
80.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
80.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
79.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
78.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
77.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
74.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
73.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
73.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
73.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
72.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
71.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
69.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
68.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
68.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
67.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
64.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
63.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
62.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
62.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
62.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
62.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
61.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
61.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
59.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
58.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
58.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
57.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
57.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
57.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
56.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
56.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
56.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
55.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
55.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
55.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
54.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
54.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
54.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
52.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
52.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
51.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
51.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
50.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
50.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
50.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
49.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
49.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
49.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
49.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
49.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
49.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
48.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
48.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
48.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
47.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
46.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
45.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
45.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
44.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
44.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
44.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
43.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
43.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
42.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
42.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
42.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
42.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
41.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
41.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
40.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
40.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
40.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
40.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
40.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
39.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
39.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
39.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
39.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
39.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
38.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
38.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
38.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
38.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
37.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
37.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
37.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
37.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
37.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
36.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
36.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
36.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
36.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
36.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
35.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
35.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
34.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
34.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
33.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
33.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
33.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
33.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
32.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
31.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
31.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
31.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
31.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
30.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
30.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
30.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
30.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
30.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
28.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
27.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
27.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
27.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
27.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
27.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
27.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
27.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
26.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
26.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
25.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
25.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
24.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
23.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
23.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
22.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
21.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
21.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
20.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
19.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
19.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
19.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
19.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
19.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
14.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
13.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
12.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
11.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
0.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 72.4
Samples: 4
Max nTPM: 80.3
Min nTPM: 66.4
Sample A
Male
80.3
Sample B
Male
68.6
Sample C
Female
66.4
Sample D
Female
74.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.