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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP2B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
50.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
48.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
45.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
37.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
35.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
34.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
33.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
32.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
30.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
29.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
27.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
22.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
21.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
21.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
21.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
19.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
18.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
3.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP2B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
54.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
45.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
44.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
42.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
42.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
36.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
35.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
35.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
33.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
32.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
30.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
28.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
28.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
28.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
28.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
27.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
27.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
26.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
26.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
25.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
24.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
23.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
23.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
23.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
23.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
22.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
21.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
21.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
21.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
20.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
20.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
19.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
18.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
18.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
18.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
18.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
17.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
17.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
16.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
16.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
15.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
14.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
14.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
14.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
13.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
13.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
11.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
9.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
7.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
6.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
6.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
5.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
4.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
4.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
4.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
3.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
3.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
2.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
2.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
1.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
1.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
0.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
0.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP2B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
55.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
49.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
43.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
40.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
39.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
38.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
36.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
33.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
32.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
31.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
31.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
31.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
26.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
26.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
24.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
24.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
23.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
21.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
20.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
20.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
15.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
14.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
7.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
4.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
3.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOP2B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
113.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
95.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
76.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
68.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
59.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
54.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
43.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
41.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
39.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
38.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
38.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
38.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
37.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
36.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
35.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
35.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
34.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
32.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
32.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
31.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
31.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
30.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
29.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
29.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
28.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
28.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
28.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
27.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
26.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
26.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
26.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
26.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
25.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
21.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
19.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
19.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
17.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
17.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
16.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
13.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
13.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
11.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
10.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
10.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
8.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
6.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
5.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
5.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
4.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
1.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077320001
Normal
0.7
CPT0011410003
Tumor
0.7
CPT0084590001
Normal
0.7
CPT0092190003
Normal
0.7
CPT0079300001
Normal
0.7
CPT0001270001
Normal
0.7
CPT0079180003
Tumor
0.6
CPT0075170001
Normal
0.6
CPT0088970003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0012640003
Normal
0.4
CPT0088550004
Tumor
0.4
CPT0001230001
Normal
0.4
CPT0012180003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0014130001
Normal
0.4
CPT0017450001
Normal
0.4
CPT0078660003
Tumor
0.4
CPT0025170003
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0088760003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0001510001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0088640003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0075720003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0025610001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0009080003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0088780001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0077110003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0025580004
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0065810003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0002270011
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0065930003
Tumor
-0.5
CPT0001500009
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
