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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC38 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
38.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
33.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
26.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
25.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
21.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
18.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
17.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
16.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
16.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
14.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
12.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
11.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
10.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
9.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
9.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC38 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
130.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
121.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
108.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
96.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
83.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
83.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
77.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
72.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
72.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
71.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
69.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
69.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
68.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
67.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
67.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
66.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
66.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
66.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
66.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
64.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
63.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
63.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
63.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
63.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
63.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
61.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
61.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
61.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
60.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
58.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
58.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
58.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
58.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
57.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
56.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
56.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
56.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
55.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
55.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
55.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
55.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
55.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
55.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
55.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
54.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
54.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
54.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
54.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
54.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
53.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
53.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
53.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
53.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
52.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
52.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
52.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
52.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
52.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
52.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
51.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
51.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
50.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
50.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
50.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
50.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
50.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
49.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
49.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
49.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
49.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
48.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
48.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
48.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
48.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
47.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
47.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
47.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
47.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
46.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
46.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
46.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
46.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
46.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
46.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
46.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
46.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
45.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
45.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
45.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
45.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
45.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
45.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
45.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
45.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
45.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
45.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
44.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
44.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
44.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
44.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
44.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
44.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
44.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
44.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
44.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
44.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
44.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
43.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
43.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
43.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
43.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
43.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
42.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
42.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
42.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
42.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
42.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
41.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
41.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
41.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
41.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
41.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
40.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
40.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
40.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
40.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
40.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
40.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
40.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
40.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
39.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
39.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
39.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
39.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
38.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
38.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
38.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
38.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
38.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
38.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
38.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
38.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
38.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
38.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
38.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
37.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
37.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
37.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
37.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
37.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
37.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
37.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
37.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
37.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
37.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
36.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
36.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
36.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
36.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
35.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
35.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
35.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
35.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
35.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
35.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
35.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
35.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
35.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
34.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
34.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
34.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
33.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
33.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
33.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
33.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
32.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
32.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
32.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
31.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
31.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
31.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
31.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
31.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
31.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
31.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
30.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
30.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
30.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
30.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
30.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
30.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
29.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
29.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
29.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
28.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
28.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
28.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
28.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
28.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
27.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
27.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
27.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
27.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
27.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
27.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
27.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
27.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
26.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
26.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
26.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
26.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
25.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
25.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
25.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
24.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
24.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
24.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
24.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
24.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
24.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
23.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
23.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
23.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
22.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
22.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
22.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
22.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
21.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
20.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
20.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
20.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
20.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
20.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
20.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
19.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
19.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
19.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
18.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
16.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
9.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
9.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC38 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
70.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
67.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
67.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
66.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
64.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
61.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
59.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
58.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
57.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
56.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
55.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
55.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
52.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
52.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
52.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
52.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
52.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
50.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
50.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
48.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
48.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
47.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
47.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
46.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
44.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
43.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
42.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
42.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
41.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
39.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
37.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
37.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
35.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
34.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
34.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
33.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
30.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
28.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
27.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
27.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
26.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
26.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
24.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
23.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC38 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
239.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
140.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
133.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
130.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
125.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
124.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
123.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
97.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
76.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
73.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
73.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
70.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
70.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
69.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
67.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
62.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
62.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
60.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
59.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
58.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
58.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
57.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
56.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
55.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
55.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
55.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
54.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
53.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
53.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
53.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
53.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
51.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
49.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
49.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
49.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
48.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
47.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
46.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
46.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
45.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
45.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
45.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
44.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
44.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
43.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
43.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
43.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
42.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
41.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
41.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
41.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
40.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
40.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
39.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
39.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
38.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
37.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
37.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
37.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
37.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
36.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
36.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
36.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
36.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
35.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
35.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
34.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
34.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
34.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
34.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
33.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
32.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
32.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
31.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
31.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
31.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
31.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
31.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
31.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
31.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
30.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
29.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
29.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
29.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
29.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
29.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
29.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
29.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
28.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
28.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
27.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
27.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
27.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
27.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
27.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
27.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
26.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
25.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
24.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
24.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
24.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
24.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
23.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
22.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
22.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
22.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
21.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
21.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
21.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
21.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
20.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
20.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
19.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
18.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
17.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
17.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
17.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
13.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
9.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
8.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
8.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
3.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092310003
Normal
1.2
CPT0014350001
Normal
1.0
CPT0023710001
Normal
0.9
CPT0086030003
Tumor
0.9
CPT0092740003
Normal
0.8
CPT0006950001
Normal
0.8
CPT0012090003
Normal
0.8
CPT0065450001
Normal
0.8
CPT0077140001
Normal
0.8
CPT0066430001
Normal
0.8
CPT0009080003
Normal
0.8
CPT0018250001
Normal
0.8
CPT0012770003
Normal
0.8
CPT0006730001
Normal
0.8
CPT0019160001
Normal
0.7
CPT0025610001
Normal
0.7
CPT0063640001
Normal
0.7
CPT0025060001
Normal
0.7
CPT0088780001
Normal
0.7
CPT0010170001
Normal
0.7
CPT0007470001
Normal
0.7
CPT0088920001
Normal
0.7
CPT0089480003
Normal
0.6
CPT0075570001
Normal
0.6
CPT0087050003
Normal
0.6
CPT0023360001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0082010001
Normal
0.6
CPT0078840001
Normal
0.6
CPT0013790003
Normal
0.6
CPT0079430001
Normal
0.6
CPT0076350001
Normal
0.6
CPT0012570003
Normal
0.6
CPT0079000001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0064400001
Normal
0.5
CPT0081620001
Normal
0.5
CPT0026420001
Normal
0.5
CPT0086370003
Normal
0.5
CPT0014130001
Normal
0.5
CPT0069010001
Normal
0.5
CPT0020020001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0012290003
Normal
0.4
CPT0020130001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0078940001
Normal
0.4
CPT0006530001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0088640003
Normal
0.3
CPT0000790001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0077500001
Normal
0.3
CPT0088570001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0024680001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0078530001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0025920001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0001540009
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0019990003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0077110003
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0012550003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0065430003
Tumor
-0.3
CPT0078800003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0001190001
Normal
-0.3
CPT0065930003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0025050003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0084590001
Normal
-0.5
CPT0079270003
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0014450004
Tumor
-0.5
CPT0010120001
Normal
-0.6
CPT0088480003
Tumor
-0.6
CPT0075720003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0001270001
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0079230003
Tumor
-0.6
CPT0025110003
Tumor
-0.6
CPT0023350003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0088760003
Tumor
-0.6
CPT0025880003
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0089020003
Tumor
-0.6
CPT0077320001
Normal
-0.6
CPT0078930003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0089460004
Tumor
-0.7
CPT0012370003
Tumor
-0.7
CPT0075170001
Normal
-0.7
CPT0066480003
Tumor
-0.7
CPT0069000003
Tumor
-0.7
CPT0010160003
Tumor
-0.7
CPT0010110003
Tumor
-0.7
CPT0025580004
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0086870003
Tumor
-0.7
CPT0007860003
Tumor
-0.8
CPT0015910003
Tumor
-0.8
CPT0079410003
Tumor
-0.8
CPT0014370004
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0065870003
Tumor
-0.8
CPT0000640003
Tumor
-0.8
CPT0077490003
Tumor
-0.9
CPT0092730003
Tumor
-0.9
CPT0081600003
Tumor
-0.9
CPT0076330003
Tumor
-0.9
CPT0065690003
Tumor
-0.9
CPT0021240003
Tumor
-0.9
CPT0088550004
Tumor
-1.0
CPT0023690003
Tumor
-1.0
CPT0025230003
Tumor
-1.0
CPT0081880003
Tumor
-1.0
CPT0079380003
Tumor
-1.0
CPT0065810003
Tumor
-1.0
CPT0001180009
Tumor
-1.0
CPT0078660003
Tumor
-1.1
CPT0092790003
Tumor
-1.1
CPT0017410003
Tumor
-1.1
CPT0088630003
Tumor
-1.1
CPT0063630003
Tumor
-1.3
CPT0086950003
Tumor
-1.3
CPT0084560003
Tumor
-1.3
CPT0075130003
Tumor
-1.4
CPT0001260009
Tumor
-1.4
CPT0001340003
Tumor
-1.5
CPT0012180003
Tumor
-1.6
CPT0017850003
Tumor
-1.6
CPT0011410003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.