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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
37.9
nTPM
HPA Brain:
109.2
nTPM
GTEx:
37.9
nTPM
FANTOM5:
63.7
Scaled Tags Per Million
Pig:
11.8
nTPM
Mouse:
1.3
nTPM
Allen mouse:
0.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
109.2
Sample id
Sample description
nTPM
Amygdala nTPM: 103.9
2695
Female, age 67, right hemisphere
170.8
2814
Male, age 76, right hemisphere
117.0
1987
Female, age 91, left hemisphere
80.3
2517
Female, age 94, left hemisphere
76.7
2514
Male, age 75, right hemisphere
74.7
Basal amygdala nTPM: 102.0
2609
Male, age 75, right hemisphere
153.5
2243
Female, age 91, right hemisphere
109.9
1955
Male, age 76, both hemispheres
106.1
2110
Male, age 80, left hemisphere
99.7
2827
Female, age 67, right hemisphere
79.6
2685
Female, age 94, left hemisphere
63.2
Central amygdala nTPM: 109.2
2515
Male, age 75, right hemisphere
132.8
1905
Male, age 76, both hemispheres
124.0
2239
Male, age 80, left hemisphere
103.4
2826
Female, age 94, left hemisphere
95.6
2701
Female, age 91, right hemisphere
90.3
Corticomedial amygdala nTPM: 87.7
2428
Male, age 75, right hemisphere
121.7
2829
Male, age 80, left hemisphere
96.9
2240
Male, age 76, both hemispheres
87.6
2242
Female, age 91, right hemisphere
78.7
2535
Female, age 67, right hemisphere
76.1
2429
Female, age 94, left hemisphere
65.1
Lateral amygdala nTPM: 103.6
2516
Male, age 75, right hemisphere
133.9
2830
Female, age 67, right hemisphere
112.7
1883
Male, age 76, both hemispheres
106.0
2256
Male, age 80, left hemisphere
102.6
2255
Female, age 91, right hemisphere
94.1
2534
Female, age 94, left hemisphere
72.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
37.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 37.9
Samples: 152
Max nTPM: 151.9
Min nTPM: 6.1
Std nTPM: 19.1
Median nTPM: 33.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
151.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
100.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
87.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
79.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
74.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
72.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
72.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
71.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
71.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
69.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
67.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
66.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
65.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
64.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
63.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
62.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
62.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
61.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
58.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
57.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
54.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
54.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
53.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
53.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
52.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
52.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
52.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
51.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
51.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
51.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
51.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
50.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
50.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
49.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
49.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
46.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
46.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
46.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
45.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
45.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
45.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
45.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
45.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
45.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
44.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
44.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
44.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
43.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
42.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
41.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
41.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
40.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
40.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
40.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
40.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
40.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
40.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
39.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
39.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
39.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
38.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
38.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
38.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
37.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
37.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
36.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
36.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
36.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
36.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
36.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
36.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
35.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
34.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
34.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
33.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
33.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
33.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
33.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
32.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
32.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
32.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
32.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
32.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
32.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
31.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
31.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
31.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
31.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
31.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
30.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
30.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
30.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
30.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
30.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
29.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
29.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
29.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
29.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
29.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
29.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
29.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
28.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
27.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
26.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
26.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
26.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
26.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
26.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
25.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
25.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
25.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
25.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
24.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
23.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
23.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
23.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
23.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
23.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
23.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
22.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
22.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
22.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
21.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
21.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
20.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
20.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
20.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
19.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
19.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
19.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
19.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
19.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
19.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
18.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
18.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
18.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
17.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
17.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
17.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
16.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
13.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
13.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
11.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
10.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
6.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
6.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 1.3
Samples: 4
Max nTPM: 2.0
Min nTPM: 0.9
Sample A
Male
0.9
Sample B
Male
2.0
Sample C
Female
1.2
Sample D
Female
1.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.