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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
240.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
161.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
110.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
105.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
79.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
73.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
63.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
57.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
49.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
40.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
39.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
36.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
33.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
31.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
29.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
29.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
26.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
20.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
18.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
16.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
16.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
148.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
133.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
127.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
120.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
113.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
113.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
111.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
110.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
102.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
101.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
101.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
99.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
99.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
99.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
96.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
95.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
95.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
94.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
92.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
91.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
88.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
88.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
88.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
88.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
87.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
87.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
87.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
87.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
85.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
85.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
84.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
84.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
83.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
82.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
81.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
80.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
80.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
79.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
79.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
79.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
79.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
79.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
77.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
77.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
77.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
76.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
74.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
74.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
73.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
73.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
73.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
73.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
72.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
70.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
69.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
69.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
69.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
69.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
68.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
68.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
68.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
67.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
67.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
67.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
67.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
67.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
65.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
65.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
65.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
64.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
64.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
63.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
63.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
63.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
63.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
63.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
63.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
63.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
62.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
61.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
61.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
61.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
61.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
61.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
60.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
59.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
59.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
59.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
59.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
58.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
57.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
57.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
56.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
56.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
56.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
56.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
56.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
55.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
55.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
55.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
54.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
54.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
54.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
54.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
54.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
54.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
54.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
54.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
54.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
53.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
53.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
53.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
53.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
53.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
53.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
53.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
53.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
53.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
52.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
52.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
52.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
51.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
51.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
51.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
51.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
50.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
50.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
50.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
49.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
49.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
49.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
49.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
48.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
48.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
48.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
48.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
48.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
48.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
48.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
47.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
47.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
47.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
46.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
46.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
46.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
45.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
45.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
45.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
45.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
44.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
44.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
44.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
44.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
44.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
44.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
44.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
43.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
43.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
43.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
43.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
42.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
42.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
42.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
42.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
42.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
42.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
42.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
42.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
42.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
41.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
41.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
41.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
41.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
41.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
41.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
41.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
40.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
40.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
40.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
40.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
40.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
40.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
39.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
39.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
39.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
39.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
39.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
38.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
38.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
38.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
38.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
37.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
37.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
37.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
37.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
37.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
37.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
36.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
36.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
36.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
36.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
36.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
36.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
36.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
35.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
35.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
35.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
35.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
35.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
35.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
35.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
34.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
34.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
34.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
34.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
34.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
34.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
33.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
33.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
33.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
32.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
32.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
32.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
32.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
32.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
32.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
31.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
31.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
31.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
31.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
30.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
30.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
30.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
29.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
29.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
29.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
28.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
28.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
28.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
27.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
26.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
26.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
26.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
26.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
26.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
25.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
25.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
25.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
24.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
23.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
23.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
23.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
22.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
22.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
22.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
22.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
21.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
21.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
20.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
18.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
16.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
10.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
5.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
219.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
153.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
106.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
105.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
97.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
96.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
96.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
96.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
95.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
94.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
93.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
92.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
89.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
84.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
84.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
81.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
79.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
79.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
77.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
77.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
76.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
75.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
72.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
71.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
71.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
67.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
64.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
64.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
63.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
62.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
61.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
60.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
59.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
57.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
55.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
54.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
54.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
53.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
52.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
52.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
51.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
51.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
50.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
50.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
47.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
46.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
46.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
44.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
42.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
42.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
40.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
40.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
40.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
39.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
38.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
38.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
37.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
37.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
36.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
36.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
35.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
35.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
33.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
32.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
23.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
131.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
106.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
95.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
79.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
69.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
57.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
45.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
44.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
44.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
40.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
38.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
38.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
38.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
37.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
35.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
34.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
33.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
32.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
31.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
31.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
30.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
29.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
28.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
27.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
27.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
26.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
26.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
24.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
23.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
23.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
20.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
18.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
17.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
17.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
15.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
15.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
14.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
13.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
11.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
10.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
9.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
6.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
3.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
