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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
61.9
nTPM
HPA Brain:
43.7
nTPM
GTEx:
61.9
nTPM
FANTOM5:
60.2
Scaled Tags Per Million
Pig:
10.0
nTPM
Mouse:
0.3
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
43.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 39.6
2828
Female, age 72, unknown
46.8
2019
Male, age 18, unknown
45.0
2411
Female, age 72, unknown
44.3
1870
Female, age 42, unknown
41.4
2586
Male, age 75, left hemisphere
39.7
1830
Male, age 51, unknown
38.1
1833
Male, age 53, unknown
37.6
1827
Male, age 72, unknown
36.6
2219
Male, age 76, both hemispheres
35.0
2666
Male, age 74, left hemisphere
32.0
Dorsal raphe nucleus nTPM: 41.0
1828
Male, age 53, unknown
45.2
2750
Male, age 76, both hemispheres
41.7
2298
Female, age 72, unknown
40.8
2016
Female, age 72, unknown
39.9
2047
Male, age 72, unknown
37.3
Inferior colliculus nTPM: 35.8
2097
Female, age 72, unknown
38.2
1848
Female, age 42, unknown
36.7
1890
Male, age 53, unknown
35.9
2849
Male, age 72, unknown
32.7
Median raphe nucleus nTPM: 32.5
2220
Male, age 76, midline
32.5
Periaquaductal grey, anterior nTPM: 34.8
2502
Female, age 75, unknown
39.3
1795
Male, age 51, unknown
33.5
1947
Male, age 18, unknown
31.7
Periaquaductal grey, dorsal nTPM: 32.9
2850
Male, age 76, both hemispheres
35.1
2464
Female, age 72, unknown
34.1
1840
Male, age 53, unknown
32.2
1831
Male, age 72, unknown
30.3
Periaquaductal grey, lateral nTPM: 33.7
2140
Male, age 76, both hemispheres
36.3
2272
Male, age 74, both hemispheres
33.2
2053
Male, age 18, unknown
31.6
Pretectal area nTPM: 37.3
1817
Female, age 42, unknown
41.9
2007
Male, age 72, unknown
41.4
2316
Male, age 76, right hemisphere
41.4
2273
Male, age 74, both hemispheres
39.7
2667
Female, age 75, unknown
39.2
1815
Male, age 53, unknown
38.8
1944
Female, age 72, unknown
38.6
1816
Male, age 51, unknown
35.2
2224
Female, age 72, unknown
33.7
2825
Male, age 18, unknown
31.8
2407
Male, age 75, both hemispheres
29.2
Red nucleus nTPM: 43.7
2503
Female, age 72, unknown
52.2
1904
Male, age 53, unknown
49.1
2769
Male, age 72, unknown
48.3
1821
Female, age 72, unknown
47.2
2785
Male, age 18, unknown
47.0
2227
Male, age 72, unknown
46.5
1865
Male, age 51, unknown
44.8
2823
Male, age 76, right hemisphere
44.2
1954
Female, age 42, unknown
43.3
2725
Female, age 75, unknown
38.5
2588
Male, age 74, left hemisphere
36.5
2584
Male, age 75, left hemisphere
26.8
Substantia nigra nTPM: 43.7
1916
Female, age 42, unknown
61.9
1851
Male, age 51, unknown
53.7
2699
Male, age 18, unknown
51.5
2241
Male, age 72, unknown
42.9
2409
Female, age 72, unknown
42.6
1941
Male, age 53, unknown
41.2
1889
Female, age 72, unknown
40.3
2590
Female, age 75, unknown
37.1
2665
Male, age 74, both hemispheres
35.1
2583
Male, age 75, right hemisphere
30.3
Superior colliculus nTPM: 37.6
2668
Female, age 75, unknown
40.6
1913
Female, age 42, unknown
40.0
1995
Male, age 72, unknown
38.9
1796
Male, age 53, unknown
38.7
2087
Female, age 72, unknown
37.7
2587
Male, age 74, left hemisphere
37.6
1895
Male, age 76, right hemisphere
37.3
1839
Male, age 51, unknown
35.7
2664
Male, age 75, both hemispheres
35.2
2261
Male, age 18, unknown
34.0
Ventral tegmental area nTPM: 43.1
2410
Female, age 72, unknown
52.5
1915
Female, age 42, unknown
52.2
2223
Female, age 72, unknown
42.2
1942
Male, age 51, unknown
38.7
2218
Male, age 76, both hemispheres
38.3
2021
Male, age 53, unknown
34.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
61.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 61.9
Samples: 139
Max nTPM: 135.2
Min nTPM: 31.0
Std nTPM: 17.4
Median nTPM: 59.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
135.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
122.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
119.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
117.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
103.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
103.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
97.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
97.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
90.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
89.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
89.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
87.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
82.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
81.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
80.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
78.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
78.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
78.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
77.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
77.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
76.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
75.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
75.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
75.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
73.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
73.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
72.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
72.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
71.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
71.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
70.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
70.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
69.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
69.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
69.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
68.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
68.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
66.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
66.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
66.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
65.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
65.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
64.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
64.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
64.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
63.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
63.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
63.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
63.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
62.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
62.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
62.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
62.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
62.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
62.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
62.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
61.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
61.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
61.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
61.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
61.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
60.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
60.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
60.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
59.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
59.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
59.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
59.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
59.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
59.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
59.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
58.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
58.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
58.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
58.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
58.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
57.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
57.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
56.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
56.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
56.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
56.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
55.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
55.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
55.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
55.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
55.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
54.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
54.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
54.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
54.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
54.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
54.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
53.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
53.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
53.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
53.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
52.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
52.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
52.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
52.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
51.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
51.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
51.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
51.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
50.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
50.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
50.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
50.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
50.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
50.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
50.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
49.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
49.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
49.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
49.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
48.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
48.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
47.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
47.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
47.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
47.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
46.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
46.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
44.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
43.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
43.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
43.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
43.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
40.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
38.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
38.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
38.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
37.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
36.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
35.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
33.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
32.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
31.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.