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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
628.1
nTPM
FANTOM5:
1013.9
Scaled Tags Per Million
Pig:
509.3
nTPM
Allen mouse:
8.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
628.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 628.1
2090
Male, age 80, both hemispheres
683.5
2301
Female, age 85, both hemispheres
671.6
2188
Female, age 91, both hemispheres
662.4
1984
Male, age 76, both hemispheres
495.0
Dorsal cochlear nucleus nTPM: 558.8
2187
Female, age 91, both hemispheres
629.7
2378
Male, age 80, both hemispheres
608.9
2802
Male, age 74, right hemisphere
529.2
2058
Male, age 76, both hemispheres
526.5
2370
Male, age 61, both hemispheres
499.5
Dorsal tegmental nucleus nTPM: 496.1
2083
Male, age 80, both hemispheres
657.8
2326
Male, age 74, both hemispheres
580.6
1936
Male, age 76, left hemisphere
481.5
2358
Male, age 61, both hemispheres
264.5
Dorsolateral tegmental area nTPM: 562.3
2751
Female, age 85, both hemispheres
818.1
2654
Male, age 80, both hemispheres
650.0
2360
Male, age 74, both hemispheres
550.3
2337
Male, age 61, both hemispheres
454.9
2141
Male, age 76, both hemispheres
338.3
Kolliker-Fuse nucleus nTPM: 601.3
2315
Male, age 76, right hemisphere
805.3
2793
Female, age 91, left hemisphere
538.4
2163
Male, age 80, both hemispheres
460.3
Lateral lemniscal nuclei nTPM: 465.5
2036
Male, age 80, both hemispheres
525.2
2320
Female, age 91, left hemisphere
503.9
2746
Female, age 85, left hemisphere
473.1
2169
Male, age 76, both hemispheres
414.3
2453
Male, age 74, right hemisphere
410.9
Lateral parabrachial nucleus nTPM: 601.8
2792
Male, age 76, both hemispheres
875.9
2013
Male, age 80, both hemispheres
609.0
2139
Female, age 85, right hemisphere
510.4
2790
Male, age 61, both hemispheres
412.0
Lateral vestibular nucleus nTPM: 505.0
2311
Male, age 80, both hemispheres
581.6
2184
Male, age 76, both hemispheres
428.4
Locus coeruleus nTPM: 353.2
2123
Female, age 91, both hemispheres
396.5
2317
Female, age 72, unknown
395.5
2788
Male, age 74, unknown
363.6
2162
Male, age 80, both hemispheres
357.8
2014
Male, age 55, unknown
350.2
2720
Male, age 74, both hemispheres
319.3
1980
Male, age 76, both hemispheres
289.6
Medial parabrachial nucleus nTPM: 554.6
2463
Female, age 85, right hemisphere
747.5
2170
Female, age 91, both hemispheres
705.1
2854
Male, age 80, both hemispheres
478.0
2786
Male, age 76, both hemispheres
448.1
2156
Male, age 61, both hemispheres
394.5
Medial periolivary nuclei nTPM: 528.2
2791
Male, age 74, right hemisphere
693.4
2081
Male, age 80, both hemispheres
616.1
2458
Female, age 91, both hemispheres
511.4
2063
Male, age 76, both hemispheres
487.7
2171
Female, age 85, both hemispheres
332.6
Motor facial nucleus nTPM: 501.5
2126
Male, age 61, both hemispheres
660.4
2365
Male, age 74, right hemisphere
615.5
2795
Female, age 91, both hemispheres
482.8
2062
Male, age 76, both hemispheres
439.9
2697
Female, age 85, both hemispheres
437.0
2327
Male, age 80, both hemispheres
373.5
Motor trigeminal nucleus nTPM: 460.7
2321
Female, age 91, both hemispheres
521.2
2560
Male, age 74, both hemispheres
504.5
2309
Male, age 76, both hemispheres
465.2
2079
Male, age 80, both hemispheres
439.7
2335
Male, age 61, both hemispheres
372.7
Nuclei of the trapezoid body nTPM: 470.2
2368
Female, age 91, both hemispheres
568.4
2166
Male, age 80, both hemispheres
536.0
1983
Male, age 76, both hemispheres
467.7
2159
Male, age 61, both hemispheres
436.4
2735
Female, age 85, both hemispheres
342.3
Nucleus raphe magnus nTPM: 423.2
2459
Female, age 91, both hemispheres
547.3
2051
Male, age 76, both hemispheres
490.6
2455
Male, age 74, both hemispheres
483.5
2328
Male, age 80, both hemispheres
464.1
2160
Male, age 61, both hemispheres
311.2
2172
Female, age 85, both hemispheres
242.8
Paramedian reticular nucleus nTPM: 554.2
2057
Male, age 80, both hemispheres
670.0
2052
Male, age 76, both hemispheres
640.0
2050
Female, age 85, both hemispheres
479.2
2313
Male, age 61, both hemispheres
427.8
Pedunculopontine tegmental nucleus nTPM: 465.3
2334
Male, age 80, both hemispheres
488.6
1921
Female, age 85, both hemispheres
467.8
2338
Male, age 61, both hemispheres
439.3
Pontine nuclei nTPM: 523.1
2454
Male, age 74, left hemisphere
715.9
2109
Female, age 72, unknown
583.9
2319
Female, age 91, both hemispheres
575.7
2115
Male, age 80, left hemisphere
509.5
1863
Male, age 55, unknown
509.0
1968
Male, age 76, left hemisphere
495.4
2727
Male, age 61, right hemisphere
449.7
2787
Female, age 85, both hemispheres
345.3
Pontine raphe nucleus nTPM: 397.6
2122
Female, age 85, midline
404.6
2853
Male, age 76, midline
390.5
Posteroventral cochlear nucleus nTPM: 622.0
2341
Male, age 80, both hemispheres
754.6
2135
Female, age 91, both hemispheres
733.7
2070
Male, age 76, both hemispheres
605.5
2371
Male, age 61, both hemispheres
556.7
2752
Female, age 85, both hemispheres
459.4
Principal sensory trigeminal nucleus nTPM: 433.1
2367
Female, age 91, left hemisphere
548.7
2008
Male, age 80, left hemisphere
419.8
2324
Male, age 76, both hemispheres
418.6
2158
Male, age 61, both hemispheres
345.1
Reticular pontine nucleus, caudal nTPM: 552.8
2457
Female, age 91, both hemispheres
620.8
2092
Male, age 76, both hemispheres
610.3
2559
Male, age 74, both hemispheres
605.3
2332
Male, age 80, right hemisphere
375.0
Reticular pontine nucleus, oral nTPM: 610.4
2361
Male, age 74, both hemispheres
794.8
1939
Male, age 80, both hemispheres
634.4
2366
Female, age 91, both hemispheres
560.6
2012
Female, age 85, both hemispheres
552.6
2167
Male, age 76, both hemispheres
509.8
Reticulotegmental nucleus nTPM: 451.5
2322
Female, age 91, both hemispheres
563.0
2333
Male, age 80, both hemispheres
497.7
2452
Male, age 74, both hemispheres
437.6
2325
Male, age 76, both hemispheres
307.7
Spinal trigeminal nucleus, oral nTPM: 471.0
1978
Male, age 76, both hemispheres
505.8
2164
Male, age 80, both hemispheres
472.2
2737
Female, age 85, both hemispheres
435.1
Subcoeruleus area nTPM: 514.8
2369
Female, age 85, left hemisphere
912.1
1958
Male, age 80, both hemispheres
477.5
2089
Male, age 76, left hemisphere
449.7
2451
Male, age 74, both hemispheres
400.0
2323
Female, age 91, left hemisphere
334.7
Superior olive nTPM: 539.9
2364
Male, age 74, right hemisphere
724.1
2020
Male, age 76, both hemispheres
631.6
2329
Male, age 80, right hemisphere
467.0
1875
Female, age 85, both hemispheres
440.2
2561
Female, age 91, both hemispheres
436.9
Ventral periolivary nuclei nTPM: 457.3
2023
Male, age 76, both hemispheres
726.2
2165
Male, age 80, both hemispheres
455.0
2794
Female, age 91, left hemisphere
351.7
2130
Female, age 85, both hemispheres
296.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 514.5
2456
Female, age 91, both hemispheres
618.4
1959
Male, age 76, both hemispheres
517.5
2449
Male, age 74, both hemispheres
500.6
2359
Male, age 61, both hemispheres
495.4
2161
Male, age 80, both hemispheres
490.8
2840
Female, age 85, both hemispheres
464.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
509.3
Pig sample
Sample description
nTPM
Pons nTPM: 509.3
Samples: 4
Max nTPM: 644.3
Min nTPM: 414.8
Sample A
Female
450.0
Sample B
Female
414.8
Sample C
Male
527.9
Sample D
Male
644.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.