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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
425.3
nTPM
HPA Brain:
568.5
nTPM
GTEx:
425.3
nTPM
FANTOM5:
1127.2
Scaled Tags Per Million
Pig:
644.8
nTPM
Mouse:
598.9
nTPM
Allen mouse:
20.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
568.5
Sample id
Sample description
nTPM
Amygdala nTPM: 568.5
2514
Male, age 75, right hemisphere
731.8
1987
Female, age 91, left hemisphere
607.1
2517
Female, age 94, left hemisphere
550.3
2695
Female, age 67, right hemisphere
477.9
2814
Male, age 76, right hemisphere
475.5
Basal amygdala nTPM: 441.9
2609
Male, age 75, right hemisphere
589.8
2110
Male, age 80, left hemisphere
540.5
2685
Female, age 94, left hemisphere
426.1
2243
Female, age 91, right hemisphere
423.7
1955
Male, age 76, both hemispheres
402.7
2827
Female, age 67, right hemisphere
268.8
Central amygdala nTPM: 463.5
2515
Male, age 75, right hemisphere
570.2
2826
Female, age 94, left hemisphere
508.2
1905
Male, age 76, both hemispheres
453.6
2239
Male, age 80, left hemisphere
450.4
2701
Female, age 91, right hemisphere
335.3
Corticomedial amygdala nTPM: 455.8
2428
Male, age 75, right hemisphere
625.4
2829
Male, age 80, left hemisphere
517.0
2242
Female, age 91, right hemisphere
486.1
2429
Female, age 94, left hemisphere
475.7
2240
Male, age 76, both hemispheres
345.9
2535
Female, age 67, right hemisphere
284.9
Lateral amygdala nTPM: 457.5
2516
Male, age 75, right hemisphere
657.0
1883
Male, age 76, both hemispheres
484.4
2256
Male, age 80, left hemisphere
468.9
2534
Female, age 94, left hemisphere
464.7
2255
Female, age 91, right hemisphere
372.4
2830
Female, age 67, right hemisphere
297.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
425.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 425.3
Samples: 152
Max nTPM: 909.6
Min nTPM: 14.7
Std nTPM: 125.1
Median nTPM: 414.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
909.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
723.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
701.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
693.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
656.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
649.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
648.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
631.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
629.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
608.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
603.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
601.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
597.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
594.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
581.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
578.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
578.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
568.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
567.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
564.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
555.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
553.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
553.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
547.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
545.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
544.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
542.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
540.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
537.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
534.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
534.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
533.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
533.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
529.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
529.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
528.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
526.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
519.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
515.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
513.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
513.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
509.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
505.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
505.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
492.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
491.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
484.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
480.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
478.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
477.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
471.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
470.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
469.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
468.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
465.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
465.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
464.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
464.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
457.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
456.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
448.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
442.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
441.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
440.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
439.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
437.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
432.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
431.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
431.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
430.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
419.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
418.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
418.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
416.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
416.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
415.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
414.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
414.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
413.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
404.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
402.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
401.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
401.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
400.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
397.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
395.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
392.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
387.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
385.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
381.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
379.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
379.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
378.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
375.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
374.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
373.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
371.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
365.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
362.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
361.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
353.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
353.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
353.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
352.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
350.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
347.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
347.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
344.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
343.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
342.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
341.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
338.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
337.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
334.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
334.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
332.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
328.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
325.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
324.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
323.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
320.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
317.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
317.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
317.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
316.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
309.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
304.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
300.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
300.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
299.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
297.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
296.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
292.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
289.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
289.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
287.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
287.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
286.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
280.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
279.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
277.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
274.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
265.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
261.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
253.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
253.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
248.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
235.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
222.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
219.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
127.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
14.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
598.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 598.9
Samples: 4
Max nTPM: 653.4
Min nTPM: 531.1
Sample A
Male
531.1
Sample B
Male
605.3
Sample C
Female
653.4
Sample D
Female
605.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.