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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
328.7
nTPM
HPA Brain:
402.2
nTPM
GTEx:
328.7
nTPM
FANTOM5:
1388.0
Scaled Tags Per Million
Pig:
56.8
nTPM
Mouse:
7.7
nTPM
Allen mouse:
0.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
402.2
Sample id
Sample description
nTPM
Amygdala nTPM: 402.2
2514
Male, age 75, right hemisphere
597.7
2695
Female, age 67, right hemisphere
508.7
1987
Female, age 91, left hemisphere
401.4
2814
Male, age 76, right hemisphere
303.0
2517
Female, age 94, left hemisphere
200.3
Basal amygdala nTPM: 212.3
2110
Male, age 80, left hemisphere
298.4
1955
Male, age 76, both hemispheres
286.6
2243
Female, age 91, right hemisphere
228.8
2609
Male, age 75, right hemisphere
179.4
2827
Female, age 67, right hemisphere
151.1
2685
Female, age 94, left hemisphere
129.4
Central amygdala nTPM: 231.8
2701
Female, age 91, right hemisphere
265.9
1905
Male, age 76, both hemispheres
245.9
2239
Male, age 80, left hemisphere
231.4
2515
Male, age 75, right hemisphere
222.6
2826
Female, age 94, left hemisphere
193.3
Corticomedial amygdala nTPM: 278.5
2242
Female, age 91, right hemisphere
361.5
2240
Male, age 76, both hemispheres
345.9
2428
Male, age 75, right hemisphere
315.4
2829
Male, age 80, left hemisphere
241.1
2429
Female, age 94, left hemisphere
206.8
2535
Female, age 67, right hemisphere
200.1
Lateral amygdala nTPM: 216.7
2256
Male, age 80, left hemisphere
350.8
1883
Male, age 76, both hemispheres
250.3
2255
Female, age 91, right hemisphere
211.8
2830
Female, age 67, right hemisphere
191.7
2534
Female, age 94, left hemisphere
171.4
2516
Male, age 75, right hemisphere
124.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
328.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 328.7
Samples: 152
Max nTPM: 2358.7
Min nTPM: 29.2
Std nTPM: 293.0
Median nTPM: 249.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
2358.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1175.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1085.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1058.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
1012.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
974.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
953.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
901.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
849.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
824.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
809.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
794.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
793.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
788.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
732.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
677.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
606.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
606.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
571.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
563.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
553.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
539.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
538.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
516.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
511.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
509.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
508.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
494.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
490.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
487.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
482.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
474.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
470.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
460.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
457.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
448.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
443.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
443.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
427.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
426.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
416.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
408.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
390.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
387.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
386.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
384.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
368.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
354.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
352.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
350.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
346.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
344.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
337.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
336.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
331.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
330.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
326.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
321.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
308.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
303.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
302.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
299.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
296.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
291.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
290.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
288.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
286.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
283.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
274.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
268.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
268.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
259.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
255.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
254.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
254.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
253.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
245.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
244.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
233.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
231.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
228.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
227.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
225.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
217.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
212.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
207.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
205.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
204.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
202.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
197.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
196.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
196.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
196.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
195.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
192.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
192.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
189.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
186.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
180.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
178.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
175.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
172.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
172.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
171.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
169.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
167.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
156.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
155.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
155.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
151.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
146.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
140.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
139.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
138.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
137.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
136.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
135.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
134.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
131.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
131.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
126.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
121.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
118.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
118.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
115.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
113.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
109.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
106.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
105.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
103.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
100.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
98.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
95.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
86.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
82.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
82.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
81.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
75.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
72.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
71.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
71.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
67.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
66.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
66.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
64.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
57.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
53.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
37.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
36.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
32.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
29.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
7.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 7.8
Samples: 4
Max nTPM: 9.6
Min nTPM: 5.7
Sample A
Male
9.6
Sample B
Male
6.4
Sample C
Female
5.7
Sample D
Female
9.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.