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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.7
nTPM
HPA Brain:
40.1
nTPM
GTEx:
47.7
nTPM
FANTOM5:
162.2
Scaled Tags Per Million
Pig:
78.2
nTPM
Mouse:
99.4
nTPM
Allen mouse:
6.1
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
40.1
Sample id
Sample description
nTPM
Amygdala nTPM: 40.1
2814
Male, age 76, right hemisphere
62.8
2514
Male, age 75, right hemisphere
41.6
2695
Female, age 67, right hemisphere
38.0
2517
Female, age 94, left hemisphere
30.5
1987
Female, age 91, left hemisphere
27.3
Basal amygdala nTPM: 25.3
2110
Male, age 80, left hemisphere
36.3
2685
Female, age 94, left hemisphere
29.8
1955
Male, age 76, both hemispheres
27.8
2827
Female, age 67, right hemisphere
25.2
2609
Male, age 75, right hemisphere
18.7
2243
Female, age 91, right hemisphere
13.7
Central amygdala nTPM: 30.7
1905
Male, age 76, both hemispheres
50.7
2239
Male, age 80, left hemisphere
29.8
2701
Female, age 91, right hemisphere
28.4
2515
Male, age 75, right hemisphere
27.9
2826
Female, age 94, left hemisphere
16.8
Corticomedial amygdala nTPM: 16.2
2240
Male, age 76, both hemispheres
23.1
2428
Male, age 75, right hemisphere
20.9
2429
Female, age 94, left hemisphere
18.3
2535
Female, age 67, right hemisphere
16.0
2829
Male, age 80, left hemisphere
12.5
2242
Female, age 91, right hemisphere
6.6
Lateral amygdala nTPM: 35.8
2830
Female, age 67, right hemisphere
47.5
1883
Male, age 76, both hemispheres
47.2
2256
Male, age 80, left hemisphere
33.5
2516
Male, age 75, right hemisphere
33.2
2534
Female, age 94, left hemisphere
30.0
2255
Female, age 91, right hemisphere
23.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 47.7
Samples: 152
Max nTPM: 220.2
Min nTPM: 3.0
Std nTPM: 36.1
Median nTPM: 38.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
220.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
186.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
178.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
167.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
140.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
138.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
121.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
114.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
114.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
108.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
103.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
102.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
101.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
100.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
95.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
90.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
87.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
84.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
82.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
82.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
81.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
80.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
79.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
79.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
77.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
70.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
70.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
69.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
68.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
67.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
67.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
66.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
65.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
63.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
63.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
60.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
60.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
59.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
59.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
57.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
56.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
55.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
55.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
54.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
54.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
53.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
53.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
52.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
51.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
50.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
50.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
50.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
50.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
50.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
49.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
48.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
47.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
47.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
47.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
47.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
46.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
44.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
43.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
43.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
42.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
42.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
41.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
41.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
40.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
39.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
39.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
39.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
39.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
39.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
37.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
37.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
37.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
35.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
35.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
35.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
35.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
34.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
34.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
34.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
34.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
33.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
32.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
32.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
32.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
31.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
30.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
30.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
30.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
30.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
29.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
29.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
29.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
28.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
28.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
26.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
26.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
26.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
26.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
26.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
26.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
26.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
25.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
24.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
24.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
24.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
24.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
23.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
23.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
23.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
23.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
22.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
22.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
22.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
21.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
21.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
20.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
20.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
19.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
19.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
19.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
18.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
18.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
18.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
18.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
18.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
18.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
16.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
15.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
15.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
12.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
12.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
11.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
11.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
10.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
9.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
9.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
9.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
9.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
8.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
7.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
6.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
6.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
6.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
3.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
99.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 99.4
Samples: 4
Max nTPM: 170.3
Min nTPM: 63.9
Sample A
Male
77.3
Sample B
Male
63.9
Sample C
Female
170.3
Sample D
Female
86.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.